DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv1 and brv3

DIOPT Version :9

Sequence 1:NP_649116.1 Gene:brv1 / 40116 FlyBaseID:FBgn0036874 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster


Alignment Length:736 Identity:280/736 - (38%)
Similarity:445/736 - (60%) Gaps:22/736 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KKFSNIIFYLTLIIIAICVACIWMFSGFRHEYGKFNMILVAFLAVTLLQILIFTPIKFTIMSLDA 67
            ||....:|.:|:.||..|:.||.:|:||:||..||..:||:.:.|.:.|.||..||||.|:|:|.
  Fly     4 KKTHWAMFAITVGIIIGCMICIAVFAGFQHEDVKFKTMLVSIVIVLIFQFLIGDPIKFVILSIDR 68

  Fly    68 AFWP--AHQAPE-TPDENANVDTFMDNLRLRLRTLRSELMITERHRNERVNLKYRLITEELWLTG 129
            |.||  .:..|. ..||....:...|.|:.||...|:.||:|.|:||.::|.:|::|..:|::.|
  Fly    69 ALWPPRIYIPPRCDKDEMDEKEERRDFLKQRLINKRANLMLTSRYRNYKLNDQYKMIAHDLFIYG 133

  Fly   130 KLFLVYFFMALAFFDELLYFNTEATELLFQCNHGDAFGLLSVGDVPDIYFFVVSSLVLAFTDGKN 194
            ..||....:.|...|:.||.||.....||..||.|..||..|..:..::.|:.|:|||||.....
  Fly   134 PYFLCLMCLVLVTRDQTLYHNTRIITDLFMYNHTDYTGLQEVYFLNQLFDFIESTLVLAFNSNST 198

  Fly   195 TSGGAPWIHAEGTRLLGVVRLRQLRTESNRLGLSLPVFTERDFSESWTLPYERVPYTDKYWPIYT 259
            .||...|.|||.:.||||:||||||..:.::||..|.|::..:...|.|||.::.|:||||.||.
  Fly   199 ESGSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSDTYYMPDWQLPYRKLHYSDKYWRIYE 263

  Fly   260 PWLPSVSVA---RDNLLMGINHVGHMFNYPESKGYKVLLSDTRHKSLKIIDYLMKKNWLDANTTA 321
            ||:| :.:.   .|.|||..:|||.:.:|||..||..||:.:...|:|:||||.:.:||..||:|
  Fly   264 PWIP-IKMGFEFLDALLMNFDHVGSLNSYPELAGYVSLLARSAANSMKVIDYLSENHWLTLNTSA 327

  Fly   322 LFMDFSLYNADANTFTVCTLWVEKFPYQ--YPDGHTRIESHTFVEQLREFTKFGMLMVFVFVVTW 384
            :|:||:|||.|.|.|::|||.|||.|:.  .||  .:::|...:|.:.:....|:|.:.::|:.:
  Fly   328 VFIDFTLYNVDVNLFSICTLRVEKTPFGGIVPD--VQVDSAKLLENVDQMPYTGLLALLIYVLVF 390

  Fly   385 LQFTKAFFLKVWYDPRQLKTLWVQVDAMIVALSLVVGMIMSVRDNLVQKMIKSVEIAVVVDFLDF 449
            :||.:...:|:||:|..||::|.::|..|..::::|.:::.:|::||..|:|.||.|..::|:||
  Fly   391 IQFAQTLAVKLWYEPHLLKSVWNKLDLFIFMVNVLVVVLVVLRESLVASMMKKVEGASKMEFIDF 455

  Fly   450 REPAQLAYLEDVVTGLAVALVTMRLWKVLQFSATFQLFTKTIAMAWDALLCTFVITVIFIIAIGI 514
            |.|:::..|..:..|..:.:.|:|||:||||::.|:|||:|:.:||.|:..|.:..|||:|....
  Fly   456 RRPSRMHQLTTITIGFLICITTLRLWRVLQFASVFKLFTRTLYLAWSAVASTAIAIVIFLIGFCF 520

  Fly   515 ATVTINGNYTSNFRDFPKGIVTVTCFAFGYTNLVYPPDIFYGGEWLGILLYTIMGFVVKYMLINL 579
            |.|||||||:|||....|.:|...|::||::..|.|.::|:||:|||||.|.::.||:..:|||:
  Fly   521 AVVTINGNYSSNFNKLVKSMVMCMCYSFGFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINV 585

  Fly   580 IVSMMRDQMASVKADRDKKVRQRITFWQFLRVEYAHFINYIVKVFHCQKGYQRKNRTVAQNIQRK 644
            .||::.|.....|..||.:...||||::||.||::..:....|:...::.|.|..||||:|:.||
  Fly   586 FVSLINDYFTVAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRNGRTVAENVSRK 650

  Fly   645 LNS---NELKRRKTKISSIYSETIYVMPIDKDLEQMKYRERIERTFTLAAILHTQMELMERLMFG 706
            |:|   ..|.||:.:....:..    .|:..:...::|::|.::...:..||:.|:.|:...:| 
  Fly   651 LDSMDRQRLMRRRLRQGRHHVS----RPVSAEDALLEYKDRGDKMVNVHYILNIQLTLIRMFLF- 710

  Fly   707 DEEGNLPSLDQEDEQVPETEE 727
            ||....|   ||.::.||.::
  Fly   711 DEYVEWP---QEQQKQPEAQD 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv1NP_649116.1 PKD_channel 165..591 CDD:285288 175/430 (41%)
brv3NP_001284831.1 PKD_channel 170..595 CDD:285288 175/427 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445324
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46093
OrthoDB 1 1.010 - - D1276906at2759
OrthoFinder 1 1.000 - - FOG0016837
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10877
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.860

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