DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv1 and PKD2L2

DIOPT Version :9

Sequence 1:NP_649116.1 Gene:brv1 / 40116 FlyBaseID:FBgn0036874 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_001287850.1 Gene:PKD2L2 / 27039 HGNCID:9012 Length:624 Species:Homo sapiens


Alignment Length:659 Identity:141/659 - (21%)
Similarity:257/659 - (38%) Gaps:131/659 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 HRN--ERVNLKYRLITEELWLTGKL--FLVYF-------FMALAFFDELLYFNTEATELLF---Q 159
            ||.  .:..|.||   :|:.:|..|  .|:||       .:.....:..:|:..:....||   .
Human     8 HRGGASKHKLHYR---KEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKVMSSLFLDTS 69

  Fly   160 CNHGDAFGLLSVGDVPDIYFFVVSSLVLA-FTDG----------KNTSGGAPWIHAEGTRLLGVV 213
            ....:.....|:..:.|.:.|:...|:.. :.|.          ||:|.    |:.|.. ||||.
Human    70 VPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSR----IYYENI-LLGVP 129

  Fly   214 RLRQLRTESNRLGLSLPVFTERDFSESWTLPYERV-PYTDKY-------WPIYTPWLPSVSVARD 270
            |:|||:..:|         |.:.:|...:|..|.. .||...       ..|.|.|..|.|....
Human   130 RVRQLKVRNN---------TCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYSTSNTNS 185

  Fly   271 NLLMGINHV----GHMFNYPESKGYKVLLSDTRHKSLKIIDYLMKKNWLDANTTALFMDFSLYNA 331
            ....|...|    |::|...:||      |:|::   |.|| |...:|:...|..:|:|||||||
Human   186 PWHWGFLGVYRNGGYIFTLSKSK------SETKN---KFID-LRLNSWITRGTRVIFIDFSLYNA 240

  Fly   332 DANTFTVCTLWVEKFPYQYPDGHTRIESHTF--VEQLREFTKFGMLM--------VFVFVVTW-- 384
            :.|.|.:..|..|     :|.....:.|..|  |:.||..:.:...:        :|:||.|.  
Human   241 NVNLFCIIRLVAE-----FPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQE 300

  Fly   385 ----LQFTKAFFLKVWYDPRQLKTLWVQVDAMIVALSLVVGMIMSVRDN-----LVQKMIKSVEI 440
                .:|..|:|..:|.        |::   :::.|...|.:..:...|     |:.:::||.| 
Human   301 VKKIKEFKSAYFKSIWN--------WLE---LLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTE- 353

  Fly   441 AVVVDFLDFREPAQLAYLEDVVTGLAVALVTMRLWKVLQFSATFQLFTKTIAMAWDALLCTFVIT 505
                .:.||...|......:.:..:.:....::::|.:.|:.|....:.|::.....::...::.
Human   354 ----KYSDFYFLACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMF 414

  Fly   506 VIFIIAIGIATVTINGNYTSNFRDFPKGIVTVTCFAFGYTNLVYPPDIFYGGEWLGILLYTIMGF 570
            .|...|.......:.|:...:|..|...|........|..|..   .|......||.:.:....|
Human   415 FIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFA---GIQQANPILGPIYFITFIF 476

  Fly   571 VVKYMLINLIVSMMRDQMASVKADRDKKVRQRITF--WQFLRVEYAHFINYIVKVFHCQKGYQRK 633
            .|.::|:|:.::::.|..:.|||  |..:.:|:.|  .:.::..|.:.:... ::...||...:|
Human   477 FVFFVLLNMFLAIINDTYSEVKA--DYSIGRRLDFELGKMIKQSYKNVLEKF-RLKKAQKDEDKK 538

  Fly   634 NR---TVAQNIQRK-------LNSNELKRRKTKISSIYSETIYVMPIDKDLE---QMKYRERIER 685
            .:   .:|:..:|:       .|:.::|:.|.::...|    |.|.|..|.:   |.::||....
Human   539 TKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKY----YSMEIQDDYQPVTQEEFRELFLY 599

  Fly   686 TFTLAAILH 694
            ...|...||
Human   600 AVELEKELH 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv1NP_649116.1 PKD_channel 165..591 CDD:285288 101/469 (22%)
PKD2L2NP_001287850.1 PKD_channel 76..497 CDD:332708 101/468 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5820
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.760

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