DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv1 and Pkdrej

DIOPT Version :10

Sequence 1:NP_649116.1 Gene:brv1 / 40116 FlyBaseID:FBgn0036874 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_035235.2 Gene:Pkdrej / 18766 MGIID:1338786 Length:2126 Species:Mus musculus


Alignment Length:733 Identity:142/733 - (19%)
Similarity:264/733 - (36%) Gaps:158/733 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIIIAICVACIW--------------MFSGFRHEYGKFNMILVAFLAVTLLQILIFTPIKFTIMS 64
            :|:...||...|              :|.|..:.|.|....|.|........:.:..|....:.|
Mouse  1443 IILPRWCVYIAWFLVFATSGISSFFIVFYGVTYGYAKSIEWLFASFCSFCQSVFLVQPCNILLRS 1507

  Fly    65 LDAAFWPAHQAPETPDENANVDT--FMDNLRLRLRTLRSELMITERHRN---ERVNLKYRLITEE 124
            ...::.|.:      .:|.:..:  ....:||:..|:..|.| .:.|.:   .|....|:.|||:
Mouse  1508 GTRSYKPKY------CKNLSWSSKYHYSEIRLQGLTMTQEEM-EQLHEDIAYVRSLSMYQPITED 1565

  Fly   125 ----------LWLTGKLFLVYFFMALAFFDELLYFNTEATELLFQCNHGDAF------------G 167
                      :.....|||.|......|...||.       |:|...|.|:|            .
Mouse  1566 KIQILRRENRIRRRSFLFLSYLVTHFIFLTLLLL-------LIFSLRHNDSFYYNQFIRHRFSVD 1623

  Fly   168 LLSVGDVPDIYFFVVS-SLVLAFTDGKNTSGGAPWIHAEGTRLLGVVRLRQLRTE-SNRLGLSLP 230
            |.:|..:.|||.::.. .|.|...|...|     ::....:::||:..:||:|.. ||:..|...
Mouse  1624 LATVMKLGDIYTWLHGVFLPLLHNDPNPT-----FLPDSSSKILGLPLVRQVRARPSNKTCLLAK 1683

  Fly   231 VFTE--------------------RDFSESWTLPYERVPYTDK------YWPIYTPWLPSVSVAR 269
            .|.:                    :.:|..|:...::  .|||      |.|....|        
Mouse  1684 KFVQSSVAGEIHCHPQYGIDPEDTQHYSSVWSKAGKQ--STDKASHGFTYKPPGKRW-------- 1738

  Fly   270 DNLLMGINHVGHMFNYPESKGY--------KVLLSDTRHKSLKIIDYLMKKNWLDANTTALFMDF 326
                  :.|...:.|...|.||        ::..|..|.|.|:      .|||||..|.|:.::.
Mouse  1739 ------VYHSYGVLNTYGSGGYVFYFFPGQQMFNSTVRLKELE------GKNWLDELTWAVIVEL 1791

  Fly   327 SLYNADANTFTVCTLWV--EKFPYQYPDGHTRIESHTFVEQLREFTKFGMLMVFVFVVTWLQFTK 389
            :..|.|  |..:|::.|  |..|....:....:.|.:    |.:|.:.....::::... |.|..
Mouse  1792 TTLNPD--TSLMCSISVVFEVSPLGVVNSSLSVYSFS----LADFNRKTSSEIYLYAAI-LIFFC 1849

  Fly   390 AFFLKVWYDPRQLKTLWVQVDAMIVALSL-----VVGMIMSVRDNLVQKMIKSVEIAVVVDFLDF 449
            |:.:...|..||.:..:::....::..||     ::.::...:..|..||:: :.:|....|:.|
Mouse  1850 AYVVDEGYIIRQERASYIRSVYNLLNFSLKCMFALLIVLFFWKYFLATKMVQ-LYLADPEAFIPF 1913

  Fly   450 REPAQLAYLEDVVTGLAVALVTMRLWKVLQFSATFQLFTKTIAMAWDALLCTFVITVIF---IIA 511
            ...:::.:...::....:.|..::..:..:|....:|..|.|..|...:..|.::..|:   .:|
Mouse  1914 HAVSRVDHFMRIILAFLLFLTILKTLRYSRFFYNVRLAQKAIQAALPGICHTALVVSIYSFMYVA 1978

  Fly   512 IGIATVTINGNYTSNFRDFPKGIVTVTCFAFGYTNLVYPPDIFYGGEWLGILLYTIMGFVVKYML 576
            .|   ..:.|.:..|:    ..::..|...|.|....:....|.|.:.||:|..:....|:..:.
Mouse  1979 FG---YLVFGQHEWNY----SNMIHATQTIFSYCVSAFQNTEFSGNKVLGVLFLSSFMLVMICIF 2036

  Fly   577 INL---IVSMMRDQMASVKADRDKKVRQRITF--------WQFL--RVEYAHFINYIVKVFHCQ- 627
            |||   ::....|:|.....:......:.:|:        :.||  |.......|:.|.:.:.| 
Mouse  2037 INLFQAVILSAYDEMKQPVYEEPSDEAEAVTYLCNRLKSGFDFLTTRSRDKDQSNFFVDMLYGQP 2101

  Fly   628 -KGYQRKNRTVAQNIQRK 644
             |..:|.....|:||..|
Mouse  2102 EKNTRRFLGLKARNINGK 2119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv1NP_649116.1 Polycystin_dom 167..363 CDD:466668 50/233 (21%)
PKD_channel 364..591 CDD:462341 42/237 (18%)
PkdrejNP_035235.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..71
REJ 130..598 CDD:366875
PLAT_polycystin 1115..1230 CDD:238850
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1379..1431
Polycystin_dom 1623..1828 CDD:466668 50/237 (21%)
PKD_channel 1829..2051 CDD:462341 40/230 (17%)
Blue background indicates that the domain is not in the aligned region.

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