Sequence 1: | NP_649116.1 | Gene: | brv1 / 40116 | FlyBaseID: | FBgn0036874 | Length: | 728 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_036016298.1 | Gene: | Pkd1 / 18763 | MGIID: | 97603 | Length: | 4316 | Species: | Mus musculus |
Alignment Length: | 668 | Identity: | 142/668 - (21%) |
---|---|---|---|
Similarity: | 247/668 - (36%) | Gaps: | 147/668 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 LTLIIIAICVACI-WMFSGFRHEYGKFNMILVAFLAVTLLQILIFTPIKFTIMSLDAAFWPAHQA 75
Fly 76 PETPDENANVDTFMDNLRL--------RLRTLRSELMITERHRNERVNLKYRLITEELWLTGKLF 132
Fly 133 LVYFFMALAFFDELLYFNTEATELLFQCNHGDAFGLLSVGDVPDIYFFVVSSLVLAFTDGKN--- 194
Fly 195 --TSGGAPWIHA-EGTRLLGVVRLRQLR---------TESNRLGLSLPVFTERDFSESWTLPYER 247
Fly 248 VPYTDKYWPIYTPWLPSVSVARDNLLMGINHVGHMFNYPESKGYKVLLSDTRHKSLKIIDYLMKK 312
Fly 313 NWLDANTTALFMDFSLYNADANTFTVCTLWVEKFPYQYPDGHTRIESHTFVEQLREFTKFGMLMV 377
Fly 378 FVFVVTWLQFTKAFFL---KVWYDPRQLKT----LWVQVDAMIVALSLVVGMIMSVRDNLVQKMI 435
Fly 436 KSVEIAVVVD-----FLDFREPAQLAYLEDVVTGLAVALVTMRLWKV---LQFSATFQLFTKTIA 492
Fly 493 MAWDALL-CTFVITVIFIIAIGIATVTINGNYTSNF---RDF----PKGIVTVTCFAFGYTNLVY 549
Fly 550 PPDIFY------GGEW---------LGILL-----YTIMGFVVK-------YMLINLIVSMMRDQ 587
Fly 588 MASVKADRDKKVRQRITF 605 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brv1 | NP_649116.1 | PKD_channel | 165..591 | CDD:285288 | 104/490 (21%) |
Pkd1 | XP_036016298.1 | LRRNT | 32..71 | CDD:214470 | |
LRR_8 | 61..127 | CDD:404697 | |||
leucine-rich repeat | 70..92 | CDD:275378 | |||
leucine-rich repeat | 93..116 | CDD:275378 | |||
PCC | 97..2731 | CDD:188093 | |||
leucine-rich repeat | 117..129 | CDD:275378 | |||
GPS | 3011..3060 | CDD:413374 | |||
PLAT_polycystin | 3118..3237 | CDD:238850 | |||
PKD_channel | 3726..4126 | CDD:400395 | 94/439 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3599 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |