DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv1 and PKD1L1

DIOPT Version :9

Sequence 1:NP_649116.1 Gene:brv1 / 40116 FlyBaseID:FBgn0036874 Length:728 Species:Drosophila melanogaster
Sequence 2:XP_016867287.1 Gene:PKD1L1 / 168507 HGNCID:18053 Length:2920 Species:Homo sapiens


Alignment Length:528 Identity:99/528 - (18%)
Similarity:189/528 - (35%) Gaps:113/528 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AIC----VACIWMFSGF-RHEYGKFNMI----LVAFLAVTLLQILIFTPIKFTIMSLDAAF---- 69
            |||    :||. :.:|| .:.:|:...:    |::...|..  |.|..|:...:|:|..|:    
Human  2198 AICGTASLACS-LGTGFLAYRFGQEQCVQWLHLLSLSVVCC--IFITQPLMVCLMALGFAWKRRA 2259

  Fly    70 ------------------------W---PAHQAPETPDENANVDTFMDNLRLRLRTLR-----SE 102
                                    |   |...:...||....|:..: ..|.:.|.||     |:
Human  2260 DNHFFTESLCEATRDLDSELAERSWTRLPFSSSCSIPDCAGEVEKVL-AARQQARHLRWAHPPSK 2323

  Fly   103 LMITERHRNERVNLKYRLITEELWLTGKLFLVYFFMALAFFDELLYFNTEATELLFQCNHGDAFG 167
            ..:....:..|...:.|....::.:...:.|:...:....|.:..|...:|....|..|..:..|
Human  2324 AQLRGTRQRMRRESRTRAALRDISMDILMLLLLLCVIYGRFSQDEYSLNQAIRKEFTRNARNCLG 2388

  Fly   168 LLSVGDVPDIYFFVVSSLVLAFTDGKNTSGGAPWIHAEGTR---------LLGVVRLRQLRTESN 223
              .:.::.|.:.:.:::|:    ||. ..||.|.....|.:         |:|...:|||:....
Human  2389 --GLRNIADWWDWSLTTLL----DGL-YPGGTPSARVPGAQPGALGGKCYLIGSSVIRQLKVFPR 2446

  Fly   224 RLGLSLPVFTERDFSESWTLPYERVPYTDKYWPIYTPWLPSVSVARDNLLMGINHVGHMFNYPES 288
            .|     ....|.||   .|..:.:|...          |.|....:..|:...:.....|.|..
Human  2447 HL-----CKPPRPFS---ALIEDSIPTCS----------PEVGGPENPYLIDPENQNVTLNGPGG 2493

  Fly   289 KGYK----VLLSDTRHKSLKIIDYLMKKNWLDANTTALFMDFSLYNADANTFTVCTLWVEKFP-- 347
            .|.:    :.|..||.::...:..|....|:|.:|.|:.:.|:|||.....||..:|.||..|  
Human  2494 CGTREDCVLSLGRTRTEAHTALSRLRASMWIDRSTRAVSVHFTLYNPPTQLFTSVSLRVEILPTG 2558

  Fly   348 ----------YQYPDGHTRIESHTFVEQLREFTKFGMLMVFVFVVTWLQFTKAFFLKVWYDPRQL 402
                      :......:.::.|..:.||   ....:.::.:.|..:....|. .|..|..||. 
Human  2559 SLVPSSLVESFSIFRSDSALQYHLMLPQL---VFLALSLIHLCVQLYRMMDKG-VLSYWRKPRN- 2618

  Fly   403 KTLWVQVDAMIVALS--LVVGMIMSVRDNLVQKMIKSVEIAVVVDFLDFREPAQLAYLEDVVTGL 465
               |:::..:.|:|:  .|.|.::::..::..:..:.:..|    |:|....|........:.|:
Human  2619 ---WLELSVVGVSLTYYAVSGHLVTLAGDVTNQFHRGLCRA----FMDLTLMASWNQRARWLRGI 2676

  Fly   466 AVALVTMR 473
            .:.|.|::
Human  2677 LLFLFTLK 2684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv1NP_649116.1 PKD_channel 165..591 CDD:285288 65/336 (19%)
PKD1L1XP_016867287.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1276906at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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