DRSC/TRiP Functional Genomics Resources

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Protein Alignment brv1 and LOXHD1

DIOPT Version :9

Sequence 1:NP_649116.1 Gene:brv1 / 40116 FlyBaseID:FBgn0036874 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_001371403.1 Gene:LOXHD1 / 125336 HGNCID:26521 Length:2273 Species:Homo sapiens


Alignment Length:585 Identity:107/585 - (18%)
Similarity:188/585 - (32%) Gaps:199/585 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 MSLDAAFWPAHQAPETPDENANV-DTFMDNLRLRLRTLRSELMITERHRNERVNLKYRLITEELW 126
            |:.....|.|    :..|:.:.: |.|...|:.||.|......||             |.|.:::
Human  1271 MTFPCGRWLA----KNEDDGSIIRDLFHAELQTRLYTPFVPYEIT-------------LYTSDVF 1318

  Fly   127 LTGK----LFLVYFFMALAFFDELLYFNTEATELLFQCNHGDAFGLLSVGDVPDIYFFVVSSLVL 187
            ..|.    ..::|...|:....:.|..|....:..|:......| ::.:.||.:|        :.
Human  1319 AAGTDANIFIIIYGCDAVCTQQKYLCTNKREQKQFFERKSASRF-IVELEDVGEI--------IE 1374

  Fly   188 AFTDGKNTSGGAPWIHAEGTRLLGVVRLRQLRTESNRLGLSLPVFTERDFSESWTLPYER----- 247
            ....|.|.:|..|..|...      |.:|:|          ||   ::|.:|:.|.|.:|     
Human  1375 KIRIGHNNTGMNPGWHCSH------VDIRRL----------LP---DKDGAETLTFPCDRWLATS 1420

  Fly   248 ----------VPY---TDKYW-----------------------PIYTPWLPS--------VSVA 268
                      |||   |:||.                       .|:|..:|.        :::.
Human  1421 EDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNIPGAGTDAKVYITIY 1485

  Fly   269 RDNLLMGINHVGHMFNYPE--SKG---------------YKVLLSDTRHKSLK-IIDYLMKK--- 312
            .|....|..::|...|...  .:|               ||:.|   ||.:.| ..|:.::|   
Human  1486 GDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKL---RHDNSKWCADWYVEKVEI 1547

  Fly   313 --------------NWL-----DANTTALFMDFSLYNAD--ANTFTVCTLWVEKFPYQYPDGHTR 356
                          .||     |.....||.: ..|..|  :|..:....|......:..|    
Human  1548 WNDTNEDEFLFLCGRWLSLKKEDGRLERLFYE-KEYTGDRSSNCSSPADFWEIALSSKMAD---- 1607

  Fly   357 IESHTFVEQLREFTKFGMLMVFVFVVTWLQF------TKAFFLKVWYDPRQLKTLWV-------- 407
            ::..|....:.::.:.|.::.:...||..:.      ::||...:..|..:.|.:|:        
Human  1608 VDISTVTGPMADYVQEGPIIPYYVSVTTGKHKDAATDSRAFIFLIGEDDERSKRIWLDYPRGKRG 1672

  Fly   408 ----QVDAMIVALSLVVGMIMSV---RDNLVQKMIKSVEIAVVVDFLDFREPAQ-LAYLEDVVTG 464
                .|:...|| .|.||:|..:   .|.      .|.|...:|:.|....|.| ..|:.:....
Human  1673 FSRGSVEEFYVA-GLDVGIIKKIELGHDG------ASPESCWLVEELCLAVPTQGTKYMLNCNCW 1730

  Fly   465 LAVAL---VTMRLWKVLQFSATFQLFTKTIAMAWDALLCTFVITVIFIIAIGIATVTINGNYTSN 526
            ||...   :|.|::.:|                 ||::....:.|::.:.:....| :.|...||
Human  1731 LAKDRGDGITSRVFDLL-----------------DAMVVNIGVKVLYEMTVWTGDV-VGGGTDSN 1777

  Fly   527  526
            Human  1778  1777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brv1NP_649116.1 PKD_channel 165..591 CDD:285288 87/478 (18%)
LOXHD1NP_001371403.1 PLAT_repeat 44..162 CDD:238854
PLAT_repeat 172..289 CDD:238854
PLAT_repeat 296..414 CDD:238854
PLAT_repeat 425..542 CDD:238854
PLAT_repeat 554..675 CDD:238854
PLAT_repeat 684..805 CDD:238854
PLAT 816..>896 CDD:412108
PLAT_repeat 1022..1142 CDD:238854
PLAT_repeat 1175..1295 CDD:238854 6/27 (22%)
PLAT_repeat 1306..1432 CDD:238854 29/166 (17%)
PLAT_repeat 1460..1580 CDD:238854 21/123 (17%)
PLAT 1629..1744 CDD:412108 26/121 (21%)
PLAT_repeat 1758..1875 CDD:238854 5/21 (24%)
PLAT_repeat 1885..2005 CDD:238854
PLAT 2018..2119 CDD:412108
PLAT_repeat 2154..2272 CDD:238854
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3599
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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