Sequence 1: | NP_649116.1 | Gene: | brv1 / 40116 | FlyBaseID: | FBgn0036874 | Length: | 728 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004918536.3 | Gene: | LOC100496797 / 100496797 | -ID: | - | Length: | 4375 | Species: | Xenopus tropicalis |
Alignment Length: | 690 | Identity: | 126/690 - (18%) |
---|---|---|---|
Similarity: | 239/690 - (34%) | Gaps: | 200/690 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 IIFYLTLIIIAICVACIWMFSGFRHEYGKFNMILVAFLAVTLLQILIFTPIKFTIMSLDAAFW-- 70
Fly 71 PAHQAPETPDENANVDTFMD---NLRL--------------RLRTLRSELMITERHRNERVNLKY 118
Fly 119 RLITEELWLTGKLFLVYFFMAL------AFFD---ELLYFNTEATELLFQCNHGDAFGLLSVGDV 174
Fly 175 PDIYFFVVSSLVLAFTDGKNTSGGAP--------------WIHAEGTRLLGVVRLRQLRTESNRL 225
Fly 226 GLSLPVFTERDFSESWTLPYERVPYTDKYWPIYTPWLPSVSVARDNLLMGINH----VGHMFNYP 286
Fly 287 ESKGYKVLLSDTRHKSLKIIDYLMKKNWLDANTTALFMDFSLYNADANTFTVCTLWVEKFPYQYP 351
Fly 352 DGHTRIESHTFVEQLREFTKFGMLMVFVFVVTWLQFTKAFFL------------KVWYDPRQLKT 404
Fly 405 LWVQVDAMIVALSLVVGMIMSVRDNLVQKMIKSVEIAVVVDFLDFREPAQLAYLEDVVTGLAVAL 469
Fly 470 VTMRLWKVLQFSATFQLFTKTIA-MAWDALLCTFVITVIFIIAIGIATVTINGNYTSNFRDFPKG 533
Fly 534 IVTVTCFAFGYTNLVYPPDIFYGGEWLGILLYTIM--GFVVKYMLIN------------LIVSMM 584
Fly 585 RDQMASVKADRDKKVRQRITFWQFLRVEYAHFINYIVKVF 624 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brv1 | NP_649116.1 | PKD_channel | 165..591 | CDD:285288 | 85/470 (18%) |
LOC100496797 | XP_004918536.3 | LRRNT | 98..129 | CDD:214470 | |
LRR_8 | 127..187 | CDD:404697 | |||
leucine-rich repeat | 153..176 | CDD:275378 | |||
PCC | 158..2745 | CDD:188093 | |||
GPS | 3007..3056 | CDD:413374 | |||
PLAT_polycystin | 3114..3232 | CDD:238850 | |||
PKD_channel | 3752..4063 | CDD:400395 | 72/401 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |