| Sequence 1: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_199293.3 | Gene: | CHR4 / 834510 | AraportID: | AT5G44800 | Length: | 2223 | Species: | Arabidopsis thaliana |
| Alignment Length: | 1349 | Identity: | 386/1349 - (28%) |
|---|---|---|---|
| Similarity: | 544/1349 - (40%) | Gaps: | 497/1349 - (36%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SSKRGADPDWKTPGKASK-----DKRPKTNAKKQKFRDEEY--CKVCSDGGDLLCCDSCPSVYHR 59
Fly 60 TCLSPPLKSIPKGDWICPRCIP------------------------------------------- 81
Fly 82 ----------------------------------------------------------------- 81
Fly 82 --LPGKA--------------------------EKI--LSWRWALDRSV-ELRTSKGEKRREYFI 115
Fly 116 KWHGMSYWHCEW----------------------------------------------------- 127
Fly 128 -------------------------IPEGQMLLHHA------------------------SMVAS 143
Fly 144 FQRRS----------------------------------DMEEPSL---------EEL------- 158
Fly 159 -------DDQD------------------------------------------------------ 162
Fly 163 ------GNLHERFY------------------RYG------IKPEWLLVQRVINHSEEPNGGTMY 197
Fly 198 LVKWRELSYNDSSWER-ESDSIPGLNQAIALY-----KKLRSSNKGRQRDRPAPTIDLNKKYEDQ 256
Fly 257 PVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLI 321
Fly 322 SVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLT 386
Fly 387 SYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHL 451
Fly 452 LNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSS 516
Fly 517 MQKKFYKHILTKNFKALNQKGGG-RVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSS 580
Fly 581 LTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGE--GYQYDRIDGSIKGDLRQK 643
Fly 644 AIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIY 708
Fly 709 RFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSE---- 769
Fly 770 --------------------------------------AIHYDDKAVADLLDRTN---------- 786
Fly 787 -----------RGIEEKESWANEYLSSFKVASYA--TKEDHEEHDDYNNDAEN-TDPFYWENLMG 837
Fly 838 KSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKEIDYSNQYPSPNRATP 886 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | 29/43 (67%) |
| CHROMO | 85..147 | CDD:237991 | 17/192 (9%) | ||
| CHROMO | 181..233 | CDD:214605 | 15/57 (26%) | ||
| SNF2_N | 270..561 | CDD:278600 | 136/291 (47%) | ||
| DEXDc | 288..440 | CDD:238005 | 70/151 (46%) | ||
| Helicase_C | 585..700 | CDD:278689 | 71/116 (61%) | ||
| CHR4 | NP_199293.3 | PHD2_CHD_II | 78..119 | CDD:277007 | 28/40 (70%) |
| HepA | 445..1168 | CDD:223627 | 276/741 (37%) | ||
| CHROMO | 530..587 | CDD:214605 | 2/56 (4%) | ||
| Chromo | 602..653 | CDD:278797 | 13/50 (26%) | ||
| DEXDc | 708..860 | CDD:238005 | 70/153 (46%) | ||
| Helicase_C | 1003..1119 | CDD:278689 | 71/116 (61%) | ||
| DUF1087 | 1289..1339 | CDD:283996 | 18/62 (29%) | ||
| SANT_TRF | 1705..1749 | CDD:212558 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 1 | 1.000 | 79 | 1.000 | Domainoid score | I3028 |
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D54215at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_101931 | |
| Panther | 1 | 1.100 | - | - | O | PTHR45623 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 9 | 8.780 | |||||