Protein Alignment Chd3 and AT5G43530

DIOPT Version :10

• Sequence 1: NP_649111.1
• Gene: Chd3 / 40111
• FlyBaseID: FBgn0023395
• Length: 892
• Species: Drosophila melanogaster
• Sequence 2: NP_199166.1
• Gene: AT5G43530 / 834373
• AraportID: AT5G43530
• Length: 1277
• Species: Arabidopsis thaliana
• Alignment Length: 954
• Identity: 218/954 - (22%)
• Similarity: 354/954 - (37%)
• Gaps: 317/954 - (33%)

  Fly    21 KRPKTNAKKQKFRDEEYCKVCSD----GGDLLCCDSCP---SVYHRTCLSPPLKSIPKGDWICP- 77
            |:....|:|.|..|.:: .|..|    |..|:...|..   .:.....::....|:.|  |..|
plant   374 KKEPVGARKVKVEDGDF-PVEKDWYLVGRSLVTATSTSKGRKLEDNEIVNFTFSSVAK--WKVPN 435

  Fly    78 -------RCIPLPGKAEKI-LSW-RWALDRSVELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQM 133
                   ||    |:..:: :.| .||:..   ||:.|        :|..|    .|...|....
plant   436 IVRFSTKRC----GEIGRLPMEWSNWAVSL---LRSGK--------VKMLG----RCVAAPPFLT 481

  Fly   134 LLHHASMVASFQRRSDM------------EEPSLEELDDQDGNLH---ERFYRYGIKPEWLLVQR 183
            ::....:..||...|.:            ..|:||      ..||   :.|....|||    .|:
plant   482 MMQEIMLYVSFYIHSSIFTDVSKSTWRIGSSPNLE------STLHPLLQLFKHLTIKP----YQK 536

  Fly   184 VINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKLRSSNKGRQRDRPAPTID 248
            .....||.|.      :.|.|:..|...||.:        .:|:.|:    .||.|:     :::
plant   537 AEFTPEELNS------RKRSLNLEDDYDERAA--------LLAIAKR----RKGCQQ-----SLE 578

  Fly   249 LNKKYEDQP-------------VFLKE------AGLKLHPFQIEGVSWLRYS------------- 281
            .||..|:.|             ..|:|      ....|.|:|.:.:.|:..|
plant   579 QNKDEEEAPESYMNRVVGAADSYNLEEMEAPSTLTCNLRPYQKQALYWMSESEKGIDVEKAAETL 643

  Fly   282 ---W-------------------GQG---IPT--------ILADEMGLGKTIQTVVFLYSL---- 309
               |                   |:.   .||        ||||.||||||:.|:..:.:.
plant   644 HPCWEAYRICDERAPSIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRG 708

  Fly   310 ------------------FKEGH-------CRGPFLISVPLSTLTNWERELELWA-PELYCV-TY 347
                              .||.|       .:|..||..|::.|:.|:.|||..: |:...| .|
plant   709 NPENEDVLVADVNADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVY 773

  Fly   348 VGGKTARAVIRKHE---ISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVD 409
            .||.      |.|:   |:..:|...|         :.|:.::|:....::.| ..|||..:|:|
plant   774 YGGD------RTHDAKAIASHDVVLTT---------YGVLTSAYKQDMANSIF-HRIDWYRIVLD 822

  Fly   410 EAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFND----LQTFQAEF 470
            |||.::|.:::..:...:.....:..||||||||.||:|:.||.||....:.:    .:..|..:
plant   823 EAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCFLHVEPWCNWAWWSKLIQKPY 887

  Fly   471 TDVSKEEQVKRLHEILEPHMLRRLK------ADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN 529
            .: .....:|.:..||.|.||||.|      ..::..:||....::..|.|..::.||..:..::
plant   888 EN-GDPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRS 951

  Fly   530 FKALNQ-KGGGRV----CSLLNIMMDLRKCCNHPYLFPSAAEE---------------------A 568
            ....:| ...|:|    .::|.:::.||:|||||:|..|.|:.                     :
plant   952 KVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRADSQQYADLDSLARRFLDNNPDSVS 1016

  Fly   569 TISPSGLY--------------------------------------------------------- 576
            ..:||..|
plant  1017 QNAPSRAYIEEVIQDLRDGNSKECPICLESADDPVLTPCAHRMCRECLLTSWRSPSCGLCPICRT 1081

  Fly   577 -----EMSSLT-------------KASGKLDLLSKMLKQLK--ADNHRVLLFSQMTKMLNVLEHF 621
                 |:.|..             |.|.|:..|.|.|:::|  ....:.::|||.|..|::||..
plant  1082 ILKRTELISCPTDSIFRVDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIP 1146

  Fly   622 LEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNP 686
            |...|:::.|.||.:....|:|.:..||: ..:..:.|:|.:|||:|:||..|.:|.:.|..|||
plant  1147 LRRRGFEFLRFDGKLAQKGREKVLKEFNE-TKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNP 1210

  Fly   687 HNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMML 730
            ..:.||..|.||:|||:.|.:.||:..::||||:.||...|..:
plant  1211 AVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRM 1254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chd3	NP_649111.1	PHD2_CHD_II	37..79	CDD:277007	9/56 (16%)
		CD_CSD	82..146	CDD:475127	13/65 (20%)
		CD2_tandem_CHD3-4_like	176..230	CDD:349309	11/53 (21%)
		PLN03142	266..>768	CDD:215601	159/658 (24%)
AT5G43530	NP_199166.1	HIRAN	402..490	CDD:214906	19/108 (18%)
		HepA	<542..1259	CDD:440319	178/754 (24%)
		RING-HC	1039..1079	CDD:438113	0/39 (0%)