Protein Alignment Chd3 and BRM

DIOPT Version :10

• Sequence 1: NP_649111.1
• Gene: Chd3 / 40111
• FlyBaseID: FBgn0023395
• Length: 892
• Species: Drosophila melanogaster
• Sequence 2: NP_973695.1
• Gene: BRM / 819210
• AraportID: AT2G46020
• Length: 2193
• Species: Arabidopsis thaliana
• Alignment Length: 925
• Identity: 257/925 - (27%)
• Similarity: 396/925 - (42%)
• Gaps: 248/925 - (26%)

  Fly    87 EKILSWRWALDRSVELRTSKGEKRREYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSD-- 149
            :|:|...||:.   :.||::.....:|                       |..|:..|.:|.|
plant   802 KKLLEAHWAIR---DARTARNRGVAKY-----------------------HEKMLREFSKRKDDG 840

  Fly   150 ----ME-----------EPSLEELDDQDGNLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLV 199
                ||           |..||:..:..|:..|   ||.:...:|.......|.   .||.:...
plant   841 RNKRMEALKNNDVERYREMLLEQQTNMPGDAAE---RYAVLSSFLTQTEDYLHK---LGGKITAT 899

  Fly   200 KWRELSYNDSSWERESDS------IPGLNQ------AIALYKKLRSSNKGRQRDRPAPTIDLNKK 252
            |      |....|..:::      :.||::      |....:::...|:..:.:.|.....:||.
plant   900 K------NQQEVEEAANAAAVAARLQGLSEEEVRAAATCAREEVVIRNRFTEMNAPKENSSVNKY 958

  Fly   253 YE----------DQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLY 307
            |.          .||..| :|| .|..:|:.|:.|:...:...:..|||||||||||:|.:..:.
plant   959 YTLAHAVNEVVVRQPSML-QAG-TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIA 1021

  Fly   308 SL--FKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTK 370
            .|  ||..:  ||.||.||.:.|.||:.||..|.|.:.|:.|||.|..|:.:...|:
plant  1022 YLMEFKGNY--GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV-------- 1076

  Fly   371 TMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLL 435
                  ...||||::|:||||..|.:.|..:||..:::|||.|::..:|...|.|.:||...:||
plant  1077 ------CAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLL 1135

  Fly   436 LTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEE------------------QVKRL 482
            ||||||||:|:||:.|||.|....|::.:.|...|....::|                  .:.||
plant  1136 LTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRL 1200

  Fly   483 HEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI---------------------- 525
            |:||||.||||...||..|:|.|...::|..:|::|...|..|
plant  1201 HQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPI 1265

  Fly   526 -LTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYL-FPSAAEEATISPSGLYEMSSLTKASGKL 588
             ..|.::.||           |..|:|||.||||.| :|...:         :....|.::.|||
plant  1266 YQAKIYRTLN-----------NRCMELRKACNHPLLNYPYFND---------FSKDFLVRSCGKL 1310

  Fly   589 DLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVS 653
            .:|.::|.:|:...|||||||.|||:|::||.:|:.....|.||||:...:.|:.||..||||.:
plant  1311 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDT 1375

  Fly   654 EHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKV-MIYRFVTHNSVE 717
            :.|:||||.||.|.|:||.|||||:|:|.|.||.|:.||.:||||:||.::| :||
plant  1376 DCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIY--------- 1431

  Fly   718 ERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRF-GTEDLFKD--GKSEAIHYDDKAVA 779
                                 |..:....|..:.||.||. |:.||..|  ||       |:.:.
plant  1432 ---------------------MEAVVEKLSSHQKEDELRSGGSVDLEDDMAGK-------DRYIG 1468

  Fly   780 DLLDRTNRGIEE-KESWANEYLSSFKVASYATKE-----------DHEEHDDYNNDA-------- 824
            .:.......|:: |...|:|.:::.:.....|.|           |.|.:.:..:|.
plant  1469 SIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNR 1533

  Fly   825 -------------ENTDPFYWENLMGKSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKEIDYSN 876
                         :..:.|.|...| .:..::||..:..:::....|..:..|
plant  1534 MIARSEEEVELFDQMDEEFDWTEEM-TNHEQVPKWLRASTREVNATVADLSKK------------ 1585

  Fly   877 QYPSPNRATPSSIVL 891
              ||.|..:.|::::
plant  1586 --PSKNMLSSSNLIV 1598

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chd3	NP_649111.1	PHD2_CHD_II	37..79	CDD:277007
		CD_CSD	82..146	CDD:475127	10/58 (17%)
		CD2_tandem_CHD3-4_like	176..230	CDD:349309	10/65 (15%)
		PLN03142	266..>768	CDD:215601	194/549 (35%)
BRM	NP_973695.1	QLQ	462..497	CDD:214931
		PLN03142	831..>1438	CDD:215601	216/686 (31%)
		DEXHc_SMARCA2_SMARCA4	978..1213	CDD:350754	95/251 (38%)
		BROMO	1900..2004	CDD:197636