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Protein Alignment Chd3 and zranb3

DIOPT Version :10

Sequence 1:	NP_649111.1	Gene:	Chd3 / 40111	FlyBaseID:	FBgn0023395	Length:	892	Species:	Drosophila melanogaster
Sequence 2:	XP_017208927.2	Gene:	zranb3 / 553237	ZFINID:	ZDB-GENE-060712-1	Length:	1079	Species:	Danio rerio

Alignment Length:	705	Identity:	181/705 - (25%)
Similarity:	286/705 - (40%)	Gaps:	159/705 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   229 KKLRSSNKGRQRDRPAPTIDLNKKYEDQ--PVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILA 291
            |.::|..|....:     :.||.|...|  |..|:|   ||.|||.|||.:.....|:   .::|
Zfish     4 KTMKSQGKSAPEE-----VSLNGKDALQLLPQKLRE---KLMPFQREGVCFALSRNGR---CMIA 57

  Fly   292 DEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAV 356
            ||||||||||.:...| :||:   ..|.||.||.|....|..|||.|.|||
Zfish    58 DEMGLGKTIQAISVAY-IFKQ---EWPLLIVVPSSLKYPWIEELEKWIPEL-------------- 104

  Fly   357 IRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDA-AFLGCID---WAALVVDEAHRLRSN 417
             ...:|:..|..|.||..:.::    |.:..|..::.|| |.|..::   :|.::|||:|.|:|.
Zfish   105 -DPRDINLVESKTDTMSISTSK----VTILGYGLLTTDARALLEALNKQQFAVVLVDESHYLKSR 164

  Fly   418 QSKFFRILSKYRIGYK--LLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFT--------- 471
            .:...:||.......|  :||||||.....||||..::.|...:|.....:..::.
Zfish   165 NAARSKILVPIIQSAKRAILLTGTPALGRPEELFMQIDALYPRRFGTWSDYANKYCNAHYRYFGA 229

  Fly   472 ----DVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKA 532
                |......:..||:.|...|:||||..||..:|||....:..:|.....|.......:..|.
Zfish   230 RRQWDCRGASHLDELHKRLSEIMIRRLKNQVLTQLPPKIRQRIPFDLPKDAAKEASASFEQWEKL 294

  Fly   533 LNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKML-- 595
            ::.:...:...:::::                        :.:|:.:::.||....|.:..||
Zfish   295 MSSESENQFVEVMSLI------------------------THMYKQTAVAKAGAVKDYIKMMLES 335

  Fly   596 KQLKADNHRVLLFSQMTKMLNV-LEHFLEGEGYQYDRIDGSIKGDLRQKAIDRF-NDPVSEHFVF 658
            :|||     .|:|:....||.. .|..:|.:. .|.|||||:....|.:.:.|| |||.:.  |.
Zfish   336 EQLK-----FLVFAHHLSMLQACTEAVIEAKA-GYIRIDGSVPSAERIQLVHRFQNDPDTR--VA 392

  Fly   659 LLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQV 723
            :||.:|.|.|:....|..|:..:..|||.:..||..||||:||...|.|:..:...:.:..:..:
Zfish   393 VLSIQAAGQGLTFTAASHVVFAELYWNPGHIKQAEDRAHRIGQTATVHIHYLIAKGTFDTVMWAM 457

  Fly   724 AKHKMMLTHLVVRPGMGGMTTNFSKDELE---------DILRFG---TEDLFKDGKSEAIHYDDK 776
            ...|..:|         |...|..|:.|:         |.|.|.   |.:....|.||    |||
Zfish   458 LNRKETVT---------GSALNGKKEYLKAEEGDQEKWDFLNFAQAWTPNQMLKGDSE----DDK 509

  Fly   777 AVADLLDRTNRGIEEKESWANEYLSSFK------VASYATKEDHEEHDDYNNDAENTDPFYWENL 835
                      .|:         :.|.|:      :.|:.:...|:|......:...:|
Zfish   510 ----------DGV---------FFSHFERDKQHDIRSFFSPSVHKEKKRKRTEDSTSD------- 548

  Fly   836 MGKSQPKLPK-KQKKQSQQSQ-VDVESIMGKGKRIRKEIDYSNQYPSPNRATPSS 888
             |...|:||. .:..|:.::| .|:.:..|:        |:|.|.....:.:|.|
Zfish   549 -GSPLPQLPAGAEPTQTPETQSFDLTADQGE--------DFSPQVKRFRQVSPLS 594

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.