Sequence 1: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524850.2 | Gene: | lds / 45894 | FlyBaseID: | FBgn0002542 | Length: | 1061 | Species: | Drosophila melanogaster |
Alignment Length: | 781 | Identity: | 183/781 - (23%) |
---|---|---|---|
Similarity: | 320/781 - (40%) | Gaps: | 214/781 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 141 VASFQRRSDMEEPSLEELDDQDGNLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELS 205
Fly 206 YNDSSWERESDSIPGL----NQAIALYKKLRSSNKGRQRDRPAPTIDLNKKYEDQPVFLKEAGLK 266
Fly 267 LHPFQIEGVSWLRYSWGQ-GIPT--ILADEMGLGKTIQTVVFLYSLFKEGH-------------- 314
Fly 315 ----------------------CRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTAR--A 355
Fly 356 VIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFI-----SVDAAFLGCIDWAALVVDEAHRLR 415
Fly 416 SNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVK 480
Fly 481 RLHEILEPHMLRRLKADV-----LKSMPPKSEFIVRVELSSMQKKFYKHILT------------- 527
Fly 528 ------------KNFKALNQ---------------------KGGGRVCSLLNIMMDLRKCCNHPY 559
Fly 560 LF------------------------------------------------------PSAAEEATI 570
Fly 571 SPS--GLYEMS----SLTKASGKLDLLSKMLKQ--LKADNHRVLLFSQMTKMLNVLEHFLEGEGY 627
Fly 628 QYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQA 692
Fly 693 FSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRF 757
Fly 758 G 758 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | |
CHROMO | 85..147 | CDD:237991 | 0/5 (0%) | ||
CHROMO | 181..233 | CDD:214605 | 12/55 (22%) | ||
SNF2_N | 270..561 | CDD:278600 | 90/387 (23%) | ||
DEXDc | 288..440 | CDD:238005 | 46/196 (23%) | ||
Helicase_C | 585..700 | CDD:278689 | 39/116 (34%) | ||
lds | NP_524850.2 | SNF2_N | 442..805 | CDD:278600 | 90/387 (23%) |
DEXDc | 459..634 | CDD:238005 | 46/196 (23%) | ||
HELICc | 885..1014 | CDD:238034 | 45/128 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467204 | |
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |