Sequence 1: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014591.1 | Gene: | Mi-2 / 40170 | FlyBaseID: | FBgn0262519 | Length: | 1983 | Species: | Drosophila melanogaster |
Alignment Length: | 939 | Identity: | 623/939 - (66%) |
---|---|---|---|
Similarity: | 712/939 - (75%) | Gaps: | 93/939 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 WKTP-----GKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIP 70
Fly 71 KGDWICPRCI--PLPGKAEKILSWRWALDRSVE--LRTSKGEKR-----REYFIKWHGMSYWHCE 126
Fly 127 WIPEGQMLLHHASMVASFQRRSDMEEP-----SLEELD------------------DQDGNLHER 168
Fly 169 FYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDSIPGLNQAIALYKKLRS 233
Fly 234 -------------SNKGRQ--------RDRPA---------PTIDLNKKYEDQPVFLKEAGLKLH 268
Fly 269 PFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWER 333
Fly 334 ELELWAPELYCVTYVGGKTARAVIRKHEISFEEVT---TKTMRENQTQYKFNVMLTSYEFISVDA 395
Fly 396 AFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKF 460
Fly 461 NDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI 525
Fly 526 LTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDL 590
Fly 591 LSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEH 655
Fly 656 FVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERI 720
Fly 721 MQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFK-DGKSEAIHYDDKAVADLLDR 784
Fly 785 TNRGIEEKESWANEYLSSFKVASYATKEDHEEHDD--YNNDAENTDPFYWENLMGKSQPKLPKKQ 847
Fly 848 KKQSQQSQVDVESIMGKGKRIRKEIDYSN 876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | 29/41 (71%) |
CHROMO | 85..147 | CDD:237991 | 41/68 (60%) | ||
CHROMO | 181..233 | CDD:214605 | 32/51 (63%) | ||
SNF2_N | 270..561 | CDD:278600 | 231/293 (79%) | ||
DEXDc | 288..440 | CDD:238005 | 116/154 (75%) | ||
Helicase_C | 585..700 | CDD:278689 | 93/114 (82%) | ||
Mi-2 | NP_001014591.1 | CHDNT | 138..190 | CDD:285335 | |
PHD1_CHD_II | 380..422 | CDD:277006 | 2/4 (50%) | ||
PHD2_CHD_II | 440..482 | CDD:277007 | 29/41 (71%) | ||
CHROMO | 490..558 | CDD:237991 | 41/68 (60%) | ||
CHROMO | 615..667 | CDD:214605 | 32/51 (63%) | ||
SNF2_N | 734..1028 | CDD:278600 | 231/293 (79%) | ||
DEXDc | 751..907 | CDD:238005 | 116/155 (75%) | ||
Helicase_C | 1053..1167 | CDD:278689 | 93/113 (82%) | ||
DUF1087 | <1292..1337 | CDD:283996 | 21/55 (38%) | ||
DUF1086 | 1380..1517 | CDD:283992 | |||
CHDCT2 | 1756..1927 | CDD:285336 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45471562 | |
Domainoid | 1 | 1.000 | 296 | 1.000 | Domainoid score | I346 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D35578at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 1 | 1.000 | - | - | otm46623 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101931 | |
Panther | 1 | 1.100 | - | - | P | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.750 |