Sequence 1: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285113.1 | Gene: | Lint-1 / 32055 | FlyBaseID: | FBgn0030274 | Length: | 602 | Species: | Drosophila melanogaster |
Alignment Length: | 441 | Identity: | 76/441 - (17%) |
---|---|---|---|
Similarity: | 145/441 - (32%) | Gaps: | 97/441 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 480 KRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGGRVCSL 544
Fly 545 LNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKAD-NHRVLLF 608
Fly 609 SQM---TKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGIN 670
Fly 671 LATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKMM-LTHLV 734
Fly 735 V--------RPGMGGMTTNF-----SKDELEDILRFG------------TEDL----FKDGKSEA 770
Fly 771 IHYDDKAVADLLDRTNRGIEEKESWANEYLSSFKVASYATKEDHEEHDDYNNDAENTDPFYWENL 835
Fly 836 MGKSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKEIDYSNQYPSPNRATP 886 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | |
CHROMO | 85..147 | CDD:237991 | |||
CHROMO | 181..233 | CDD:214605 | |||
SNF2_N | 270..561 | CDD:278600 | 14/80 (18%) | ||
DEXDc | 288..440 | CDD:238005 | |||
Helicase_C | 585..700 | CDD:278689 | 21/118 (18%) | ||
Lint-1 | NP_001285113.1 | PHD | 548..593 | CDD:214584 | |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |