Protein Alignment Chd3 and Aire

DIOPT Version :9

• Sequence 1: NP_649111.1
• Gene: Chd3 / 40111
• FlyBaseID: FBgn0023395
• Length: 892
• Species: Drosophila melanogaster
• Sequence 2: XP_006256309.1
• Gene: Aire / 294328
• RGDID: 1311139
• Length: 551
• Species: Rattus norvegicus
• Alignment Length: 69
• Identity: 32/69 - (46%)
• Similarity: 43/69 - (62%)
• Gaps: 2/69 - (2%)

  Fly    23 PKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCIPLPGKAE 87
            |..|..:...::|:.|.||.|||:|:|||.||..:|..||||||:.||.|.|.|..|  |.|:.:
  Rat   286 PLPNEPQVHQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCC--LQGRIQ 348

  Fly    88 KILS 91
            :.||
  Rat   349 QNLS 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Chd3	NP_649111.1	PHD2_CHD_II	37..79	CDD:277007	24/41 (59%)
		CHROMO	85..147	CDD:237991	2/7 (29%)
		CHROMO	181..233	CDD:214605
		SNF2_N	270..561	CDD:278600
		DEXDc	288..440	CDD:238005
		Helicase_C	585..700	CDD:278689
Aire	XP_006256309.1	Sp100	17..103	CDD:281203
		SAND	198..264	CDD:295351
		PHD1_AIRE	300..342	CDD:277014	24/41 (59%)
		PHD2_AIRE	433..475	CDD:277015

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0383
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900