DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd3 and phf-32

DIOPT Version :10

Sequence 1:NP_649111.1 Gene:Chd3 / 40111 FlyBaseID:FBgn0023395 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_001355360.1 Gene:phf-32 / 184600 WormBaseID:WBGene00008902 Length:208 Species:Caenorhabditis elegans


Alignment Length:223 Identity:56/223 - (25%)
Similarity:89/223 - (39%) Gaps:55/223 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DPDWKTPGKASKDKRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIP-- 70
            ||  |..|:.|.....:.:.:...:.::..|.:|:|||.::.|::||:.:|..||.  ||:||  
 Worm     4 DP--KMRGECSSSATSEPDDQNWLWPEQNKCGMCADGGTIIWCETCPASFHAFCLG--LKTIPEP 64

  Fly    71 -KGDWICPR---------CIPLPGKAEKILSWRWALDRSVELRTSKGEKRREYFIKWHGMSYWHC 125
             |..:||.|         .:|..||         ...::|.|:|.             ||.....
 Worm    65 EKDTFICHRDKISKNNRLAVPSEGK---------VFIQNVFLQTM-------------GMLNPMN 107

  Fly   126 EWIPEGQMLLHHASMVASFQRRSDMEEPSLEELDDQDGNLHERFYRYGIK-PEWLLVQRVINHSE 189
            ..|||.: ..|....||:...::..:..||:....|..:|.||.....|| .|.:|..|.|..:|
 Worm   108 TKIPEIE-AFHETINVANTDIQTSTKNTSLDGKIKQYSDLEERNLDIFIKCCESMLELRKILEAE 171

  Fly   190 E----PNGG-----------TMYLVKWR 202
            .    |..|           |:.::|.|
 Worm   172 NLDLLPRAGKCGTKRTTVAATLKIIKLR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd3NP_649111.1 PHD2_CHD_II 37..79 CDD:277007 19/53 (36%)
CD_CSD 82..146 CDD:475127 13/63 (21%)
CD2_tandem_CHD3-4_like 176..230 CDD:349309 10/42 (24%)
PLN03142 266..>768 CDD:215601
phf-32NP_001355360.1 PHD_SF 32..71 CDD:473978 16/40 (40%)
Blue background indicates that the domain is not in the aligned region.

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