Sequence 1: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005256484.1 | Gene: | CHD3 / 1107 | HGNCID: | 1918 | Length: | 2115 | Species: | Homo sapiens |
Alignment Length: | 953 | Identity: | 509/953 - (53%) |
---|---|---|---|
Similarity: | 648/953 - (67%) | Gaps: | 94/953 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 RGADPDWKTPGKASKDKRPKTNAKKQKFRDE--------------EYCKVCSDGGDLLCCDSCPS 55
Fly 56 VYHRTCLSPPLKSIPKGDWICPRCI--PLPGKAEKILSWRWA-----------LDRSVEL---RT 104
Fly 105 SKGEKRREYFIKWHGMSYWHCEWIPEGQMLLHHASMVASFQRRSDMEEPSLEELD----DQDG-- 163
Fly 164 -----------NLHERFYRYGIKPEWLLVQRVINHSEEPNGGTMYLVKWRELSYNDSSWERESDS 217
Fly 218 IPGLNQAIALY---------------KKLRSSNKGRQRDRP--APTIDLNKKYEDQPVFLKEAGL 265
Fly 266 KLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTN 330
Fly 331 WERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMR-----ENQTQYKFNVMLTSYEF 390
Fly 391 ISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFL 455
Fly 456 SSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKK 520
Fly 521 FYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKAS 585
Fly 586 GKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFND 650
Fly 651 PVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNS 715
Fly 716 VEERIMQVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGK--------SEAIH 772
Fly 773 YDDKAVADLLDRTNRGIEEKE-SWANEYLSSFKVASYATKED---HEEHDDYNNDAENTDPFYWE 833
Fly 834 NLMGKSQPKLPKKQKKQSQQSQVDVESIMGKGKRIRKEIDYSN 876 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | 27/41 (66%) |
CHROMO | 85..147 | CDD:237991 | 26/75 (35%) | ||
CHROMO | 181..233 | CDD:214605 | 22/66 (33%) | ||
SNF2_N | 270..561 | CDD:278600 | 197/295 (67%) | ||
DEXDc | 288..440 | CDD:238005 | 99/156 (63%) | ||
Helicase_C | 585..700 | CDD:278689 | 88/114 (77%) | ||
CHD3 | XP_005256484.1 | CHDNT | 207..259 | CDD:285335 | |
PHD1_CHD_II | 440..482 | CDD:277006 | 3/10 (30%) | ||
PHD2_CHD_II | 517..559 | CDD:277007 | 27/41 (66%) | ||
CHROMO | 568..644 | CDD:214605 | 27/75 (36%) | ||
CHROMO | 692..744 | CDD:214605 | 21/51 (41%) | ||
SNF2_N | 798..1094 | CDD:278600 | 197/295 (67%) | ||
DEXDc | 815..973 | CDD:238005 | 99/157 (63%) | ||
MPH1 | <938..1317 | CDD:224036 | 268/378 (71%) | ||
Helicase_C | 1118..1233 | CDD:278689 | 88/114 (77%) | ||
DUF1087 | <1371..1415 | CDD:283996 | 18/51 (35%) | ||
DUF1086 | 1437..1576 | CDD:283992 | |||
CHDCT2 | 1796..>1923 | CDD:285336 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 146 | 1.000 | Domainoid score | I4543 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0383 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D35578at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000546 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101931 | |
Panther | 1 | 1.100 | - | - | O | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.780 |