DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chd3 and CHD2

DIOPT Version :9

Sequence 1:NP_649111.1 Gene:Chd3 / 40111 FlyBaseID:FBgn0023395 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_001262.3 Gene:CHD2 / 1106 HGNCID:1917 Length:1828 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chd3NP_649111.1 PHD2_CHD_II 37..79 CDD:277007
CHROMO 85..147 CDD:237991
CHROMO 181..233 CDD:214605
SNF2_N 270..561 CDD:278600
DEXDc 288..440 CDD:238005
Helicase_C 585..700 CDD:278689
CHD2NP_001262.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..243
CHROMO 282..344 CDD:237991
Chromo 379..447 CDD:278797
SNF2_N 487..768 CDD:278600
DEXDc 503..648 CDD:238005
DEAH box 617..620
Helicase_C 790..905 CDD:278689
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1030..1124
DUF5102 <1042..1165 CDD:293709
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1331..1462
DUF4208 1471..1553 CDD:290618
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1556..1638
DUF1777 1661..>1749 CDD:285811
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1680..1828
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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