DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbs-76A and homezb

DIOPT Version :10

Sequence 1:NP_649104.1 Gene:Gbs-76A / 40102 FlyBaseID:FBgn0036862 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001124256.1 Gene:homezb / 566226 ZFINID:ZDB-GENE-030131-9225 Length:718 Species:Danio rerio


Alignment Length:568 Identity:111/568 - (19%)
Similarity:190/568 - (33%) Gaps:149/568 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SLSSKLRTLGSQTTEEGEGNAE----DEPIINGTSTNTWVNSHDSEQTVTDL-QPLRHESDSFFD 104
            |::..|.......|.||..:|.    |:  :|.||::|  .:.:.|:.:.|. .|...:|.|   
Zfish    92 SVNGDLGKRNKPITPEGSESASLQTPDD--LNETSSST--EAREQEEKMDDSPSPEGTQSSS--- 149

  Fly   105 FDCELESPGSPVDECEYLRLIETASNTPHNST------------------AESGYACASMASSHS 151
              .||....||.......|...|:..:.||..                  :|..:...:::....
Zfish   150 --PELPQEKSPCSSGVQKRPTVTSGTSTHNQVNLVCLPLVSEGLKLIWVRSEQVHELDAVSELVE 212

  Fly   152 SSNDGPYFDASASTSTAAAAQDQTLPASEHKEYVNTLQLNGKHGLA---NGVQE--------EQP 205
            :.|..||   ..|...:|.|:...||..:.|.:.  :....::|::   :.:||        ::.
Zfish   213 AFNSFPY---PTSQEASALARKCALPPDQVKAWF--MMQRVRYGISWADDDIQETRRKLWHIQKK 272

  Fly   206 AFQD-----DVQED-----------EAFLQAQILNELQKHSNSLTEVEQTKPEEGKLTNGHL--- 251
            |..|     |.:||           :||:...:.|........:.:..||.|........||   
Zfish   273 ATSDECVEIDDEEDCVAVDKTQAAQQAFIPPPVSNTHADQREHIPKPSQTVPHHITTDQSHLRFG 337

  Fly   252 --------EKVEELELKDVLEVAGTTNRAPKVIAAPQEVEAFADRSQEQSPNDRVQKESSQERVP 308
                    ..|:.....:|:...| ...||:|   ||....|    |.:|.|...|....|....
Zfish   338 QNNASQSNNGVQHSLPSNVVYKNG-VGHAPQV---PQVNPGF----QSESRNAPTQNTGVQLIDT 394

  Fly   309 EGTPFEGVQGESPS--------------------------------------------DRVQ--T 327
            .|.|...:..|.||                                            .|:|  |
Zfish   395 FGRPSYVMTNEQPSALSYPELPELSQSLHCLPGKKSKAQLMALRRSFVNKSWPSDGEVQRLQKMT 459

  Fly   328 DASDERVQEEISNDTVQVESNHKSATESISTEVTTLERSPEESRNDELSPD-SGVDETDKSASNL 391
            ..|...:::..::...|:..|.::....::....:|:.. ::..:|..|.| ...||.|.:.:..
Zfish   460 GLSRREIRKWFADSRYQLRKNGRAWLNKLAKHNRSLQLM-QKDIDDIPSVDFDDNDEVDDTEAGF 523

  Fly   392 TVDVDLA----QIEQAKQDATEAVEKSGAPSRGTTVDTTDDEDDCRPQRIRRCSSLKTGKTPPGT 452
            .||||:|    .:.|:.:...|..::.|....|:| .|.....|..|.. ....|.:.|...|..
Zfish   524 EVDVDVADGEGSLNQSNETKDEVSDEGGDMDDGST-STKPLSVDVSPSP-SPSPSFRRGLVEPNV 586

  Fly   453 PGRKKIVRFADVLGLDLADVKTFL-DEIPTIPKSAFEDLEILESEPPL 499
            ..|||.....::|.      ::|| .:.||     .:|.|||:.:..|
Zfish   587 RLRKKTREQLEMLR------QSFLCCQWPT-----SDDYEILQKKTGL 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-76ANP_649104.1 PRK02224 <208..>412 CDD:179385 51/281 (18%)
PBD_PPP1R3 <434..475 CDD:455118 8/40 (20%)
CBM_21 527..629 CDD:427265
homezbNP_001124256.1 PHA03307 11..>175 CDD:223039 22/91 (24%)
homeodomain 205..254 CDD:238039 10/53 (19%)
homeodomain 428..480 CDD:238039 5/51 (10%)
homeodomain 589..643 CDD:238039 13/46 (28%)
Blue background indicates that the domain is not in the aligned region.

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