DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gbs-76A and ppp1r3c2b

DIOPT Version :10

Sequence 1:NP_649104.1 Gene:Gbs-76A / 40102 FlyBaseID:FBgn0036862 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_998345.1 Gene:ppp1r3c2b / 406459 ZFINID:ZDB-GENE-040426-2219 Length:253 Species:Danio rerio


Alignment Length:227 Identity:70/227 - (30%)
Similarity:108/227 - (47%) Gaps:46/227 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 PQRIRRCSS----------------LKTGKTPPGTPGRKKIVRFADVLGLDLADVKTFLDEIPTI 482
            |:.:|.|.|                .|.|:       |:|.|.|||..||.|..|:.|.::...|
Zfish    42 PKPLRPCISHQPVFEYRHSPSTGLLTKNGR-------REKRVAFADAKGLALITVRLFTEKEDNI 99

  Fly   483 PKSAFEDLEILESEPPL-QLG-----PKSDKLLMPLFQQP-GGLPKFLDAVREKQVSLENAAVTD 540
            |:   |.|:|    |.| :||     .|:...|...|:|| .....|.:.::|..|.||:..|| 
Zfish   100 PR---EPLKI----PRLKKLGCAKEPAKATSRLKLGFEQPCCDYQAFRNRLQEHAVLLESCNVT- 156

  Fly   541 NINQTISGSVRVRNLDFHKSVHIRYSLDGWRSYADLQANYVENSCDG--FSDIFTF-VLFGNSLH 602
              .:::.|:|||:|:.|.|:||:|.:.|.|:::.|:...|::. |.|  .:|:|.| :.....:.
Zfish   157 --KRSVLGTVRVKNVCFEKAVHVRITFDSWKTHLDVPCTYLDR-CYGEPGTDVFEFNISVPEEID 218

  Fly   603 VGQRLEFAVRF--QCKGQQFWDNNYGANYCFQ 632
            ..:|:||.|.:  .......||||.|.|||.|
Zfish   219 PRERVEFCVSYLPATFAAAEWDNNNGKNYCIQ 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-76ANP_649104.1 PRK02224 <208..>412 CDD:179385
PBD_PPP1R3 <434..475 CDD:455118 16/56 (29%)
CBM_21 527..629 CDD:427265 34/106 (32%)
ppp1r3c2bNP_998345.1 PBD_PPP1R3 67..97 CDD:439278 13/36 (36%)
CBM_21 142..247 CDD:427265 34/108 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.