DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbs-76A and H18N23.2

DIOPT Version :10

Sequence 1:NP_649104.1 Gene:Gbs-76A / 40102 FlyBaseID:FBgn0036862 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_741955.2 Gene:H18N23.2 / 181788 WormBaseID:WBGene00019211 Length:368 Species:Caenorhabditis elegans


Alignment Length:320 Identity:82/320 - (25%)
Similarity:131/320 - (40%) Gaps:84/320 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 ISNDTVQVESNHKSATESIS------TEVTTLERSPEESRNDELSPDSGVDETDKSASNLTVDVD 396
            |...:::|.|  ||.:|:::      ..:.|:.:...||...|  .|.|.|....|:|:...:||
 Worm    57 IQASSLKVRS--KSESEALNKMRLTQMNLETVRKRLSESTIKE--KDEGSDYQSHSSSSSECEVD 117

  Fly   397 LAQIEQAKQDATEAVEKSGAPSRGTTVDTTDDEDDCR-PQRIRRCSSLKTGKTPPGTPGRKKIVR 460
                                          |.|..|. |..::....|            :|.||
 Worm   118 ------------------------------DLELFCAGPLELKEEEKL------------RKSVR 140

  Fly   461 FADVLGLDLADVKTFLDEIPTIPK-----------SAFEDLEILESEPPLQLGPKSDKLLMP--- 511
            |||..|.:|..|:...:.....||           .:||:.|:...||            .|   
 Worm   141 FADDCGHELYMVRVATEPSNCPPKLSPSVLRRYRGESFEEEEMTTREP------------APVWN 193

  Fly   512 -LFQQPGG-LPKFLDAVREKQVSLENAAVTDNINQTISGSVRVRNLDFHKSVHIRYSLDGWRSYA 574
             :|:||.. ..:|.:.:...:||||| .:.:|....:.|:::|.|:.|.|||.:||:::||.||.
 Worm   194 LMFKQPAADYVRFRENMETNKVSLEN-VILNNEAYKVMGTIKVGNIAFEKSVFVRYTMNGWISYM 257

  Fly   575 DLQANYVENSCDGFSDIFTFVL-FGNSLHVGQRLEFAVRFQCKGQQFWDNNYGANYCFQC 633
            |..|.| :.|.....|.|.|.| ..:|:....::||.:.|:..|.::||:|.|.||...|
 Worm   258 DKAAIY-QPSTSKIQDTFKFDLDLPSSVEKIHQIEFCICFKANGTEYWDSNSGTNYVLHC 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-76ANP_649104.1 PRK02224 <208..>412 CDD:179385 17/79 (22%)
PBD_PPP1R3 <434..475 CDD:455118 11/40 (28%)
CBM_21 527..629 CDD:427265 36/102 (35%)
H18N23.2NP_741955.2 CBM_21 209..314 CDD:427265 38/106 (36%)

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