DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gbs-76A and LOC100486900

DIOPT Version :10

Sequence 1:NP_649104.1 Gene:Gbs-76A / 40102 FlyBaseID:FBgn0036862 Length:681 Species:Drosophila melanogaster
Sequence 2:XP_004913595.1 Gene:LOC100486900 / 100486900 XenbaseID:XB-GENE-29078531 Length:345 Species:Xenopus tropicalis


Alignment Length:270 Identity:92/270 - (34%)
Similarity:135/270 - (50%) Gaps:40/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 EQAKQDATEA-----VEKSGAPSRGTTVDTTDDEDDCRPQRIRRCSSLKTGKTPPG-------TP 453
            ::.|....||     :|:|...:||..|.........|    ||..||.|    |.       ..
 Frog    84 DEEKDGEVEAPPEKIIEESKPVTRGREVHIVPQSPTAR----RRAKSLPT----PAERRHLEVVA 140

  Fly   454 GRKKIVRFADVLGLDLADVKTFLD-EIPTIPKSAFEDLEILESEPP-------LQLGPKSDKLLM 510
            .|||:|||||.|||:|..|:.|.| ::|::|......|...|..|.       |...|.|...|.
 Frog   141 PRKKVVRFADSLGLELTSVRHFSDADVPSVPNHVLAGLRCREVCPAGAELSTLLFCAPPSTPHLE 205

  Fly   511 PLFQQPGGLPKFLDAVREKQVSLENAAVTDNINQTISGSVRVRNLDFHKSVHIRYSLDGWRSYAD 575
            |||..|...|.|::.|::::|.||:.. ||..  :|||::||.||.:.|.|.:||::|.|::.::
 Frog   206 PLFIDPCTKPDFVELVKQRRVCLESLR-TDPF--SISGNLRVLNLSYEKEVTVRYTVDSWKTSSE 267

  Fly   576 LQANYVENSCDGFSDIFTFVLFGNS-LHVGQRLEFAVRFQCKGQQFWDNNYGANYCFQCLPSSTH 639
            :||.|.....|.::|.|:|.|...: |:....||||:|::..|.::||||.|.||..:     :|
 Frog   268 VQAAYQRGCSDRYTDRFSFKLLCPALLNKEGLLEFALRYRVCGAEYWDNNAGENYMVK-----SH 327

  Fly   640 TAGGSTASPP 649
            .|   |.|||
 Frog   328 KA---TVSPP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbs-76ANP_649104.1 PRK02224 <208..>412 CDD:179385 3/15 (20%)
PBD_PPP1R3 <434..475 CDD:455118 19/47 (40%)
CBM_21 527..629 CDD:427265 38/102 (37%)
LOC100486900XP_004913595.1 PBD_PPP1R3 <100..168 CDD:455118 27/75 (36%)
CBM_21 222..324 CDD:427265 40/104 (38%)

Return to query results.
Submit another query.