DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14089 and col-129

DIOPT Version :10

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_502297.1 Gene:col-129 / 178155 WormBaseID:WBGene00000703 Length:337 Species:Caenorhabditis elegans


Alignment Length:168 Identity:61/168 - (36%)
Similarity:67/168 - (39%) Gaps:48/168 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSPAP--APPQEVIIEEDHDH---QHYHPPHYPPSYSYPYPQPQPCGCPPGPPGPPGPPGQPGQK 102
            |.|.|  ||      .||.||   .....|....:...|........||.|||||||.|||.||:
 Worm   100 GPPGPPGAP------GEDGDHGLVGEDGTPGADGNLGVPLSANGCIVCPAGPPGPPGQPGQNGQR 158

  Fly   103 ---------------GYPGPKGSKGDPGEKGPRGDKGHPGMPGIP-----------GQPGPQGPP 141
                           |.|||:|..||.|:.|..|:.|.||.||.|           |.|||||||
 Worm   159 GSDGQPGQDAMGGGQGAPGPQGPAGDNGQPGRPGNDGRPGAPGAPGTRSVGRPGTAGSPGPQGPP 223

  Fly   142 ------GYPGGSYPPYPYPPPPPPPSH----GHGGPKG 169
                  |.||....| ..|..|.|..|    |:.||.|
 Worm   224 GQNGNDGQPGNDGAP-GQPGQPGPDGHPGQPGNAGPPG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
col-129NP_502297.1 Col_cuticle_N 6..58 CDD:198156
gly_rich_SclB <110..>271 CDD:468478 56/152 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.