DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and col-122

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_501700.1 Gene:col-122 / 177789 WormBaseID:WBGene00000696 Length:300 Species:Caenorhabditis elegans


Alignment Length:138 Identity:60/138 - (43%)
Similarity:65/138 - (47%) Gaps:35/138 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSP----APAPPQEVIIEEDHDHQHYHPPHYPPSYSYPYPQPQPC-GCPPGPPGPPGPPGQPGQK 102
            |:|    ||..|.             ||...|.|...|. .|.|| .|||||||.||.||:||.:
 Worm   116 GTPGRPGAPGAPG-------------HPGKPPQSPCEPL-TPPPCPACPPGPPGAPGAPGKPGSE 166

  Fly   103 GYPGPKGSKGDPGEKGPRGDKGHPGMP------GIPGQPGPQGPPGYPGGSYPPYPYPPPPPPPS 161
            |.|||      ||..||.|..|.||.|      |.||:||.|||||.||.|..|.|..|..|   
 Worm   167 GPPGP------PGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQPGQP--- 222

  Fly   162 HGHGGPKG 169
             |..||:|
 Worm   223 -GRAGPRG 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
col-122NP_501700.1 Col_cuticle_N 11..60 CDD:198156
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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