DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and col-118

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001122798.1 Gene:col-118 / 177699 WormBaseID:WBGene00000692 Length:297 Species:Caenorhabditis elegans


Alignment Length:189 Identity:59/189 - (31%)
Similarity:72/189 - (38%) Gaps:65/189 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LITLQTGSPAPAPPQE-VIIEEDHDHQHYHPPHYPPSYSYPYPQPQPCGCPPGPPGP---PGPPG 97
            |:.:|....||:.|.| .::..|......      |.:......||   ||||||||   ||.||
 Worm    56 LMDVQIRHTAPSRPLENPLLRRDKRFTKL------PDWCQCDSAPQ---CPPGPPGPQGAPGAPG 111

  Fly    98 QPGQ----------------------------KGYPGPKGSKGDPGEKGPRGDKGHP-------G 127
            .||:                            :|.|||.|..|..|::||.|..|.|       |
 Worm   112 TPGENGPRGMDNPHSLGSTSCDQQSIGCVQCPRGPPGPPGDVGSVGQRGPDGASGAPGAASQIHG 176

  Fly   128 MPGIPGQPGPQGPPGYPG-GSYPPYP---------YPPPPPPPS-------HGHGGPKG 169
            .||:||.||..|.||.|| ...|.:|         .|.||.||.       :|..|.||
 Worm   177 KPGLPGPPGDAGAPGAPGQDGAPGHPGADGQRQRGQPGPPGPPGRPGKVGINGEPGQKG 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
col-118NP_001122798.1 Col_cuticle_N 4..56 CDD:198156 59/189 (31%)
Collagen 187..259 CDD:189968 16/49 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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