DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and dpy-13

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_500519.1 Gene:dpy-13 / 177187 WormBaseID:WBGene00001074 Length:302 Species:Caenorhabditis elegans


Alignment Length:158 Identity:61/158 - (38%)
Similarity:69/158 - (43%) Gaps:45/158 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSP-APAPPQEVIIEEDHDHQHYHPPHYPPSYSYP-----YPQ-------PQPC-GCPPGPPGPP 93
            |:| ||..|..              |..|.:..:|     .||       |.|| .||.||||.|
 Worm   109 GAPGAPGKPGR--------------PGKPGAPGFPGNPGKAPQKPCEEITPPPCKPCPQGPPGAP 159

  Fly    94 GPPGQPGQK---GYPGPKGSKGDPGEKGPRGDKGHPGMPGIPGQPGPQGPP--------GYPGGS 147
            |.||..|.|   |.||..||...|||:||:|..|.||.||.||.||.:|.|        |.||.:
 Worm   160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGST 224

  Fly   148 YPPYPYPPPPP--PPSH----GHGGPKG 169
            ..|.|..||.|  .|.:    |..||||
 Worm   225 GEPGPVGPPGPSGQPGNDGTPGQPGPKG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
dpy-13NP_500519.1 Col_cuticle_N 12..64 CDD:198156
Collagen <104..>135 CDD:189968 8/39 (21%)
Collagen 165..210 CDD:189968 23/44 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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