DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and sqt-1

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001369874.1 Gene:sqt-1 / 174731 WormBaseID:WBGene00005016 Length:324 Species:Caenorhabditis elegans


Alignment Length:209 Identity:58/209 - (27%)
Similarity:73/209 - (34%) Gaps:94/209 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSPAPAPPQEVIIEEDHDHQHYHPPHYPPSYSYP------------------------------- 76
            |||: |||.:             ||..||.::.|                               
 Worm    84 GSPS-APPGQ-------------PPAVPPVFNQPKTPNGANGNGPTCNCNADNKCPAGPSGPKGV 134

  Fly    77 -----------------------YPQPQPCG---CPPGPPGPPGPPGQPGQKGYPGPKGSKGD-- 113
                                   .||.:..|   ||.||.||||..|:||.:|.|||:|..|:  
 Worm   135 PGVPGLDGVPGLDGVPGVGADDIAPQRESVGCFTCPQGPVGPPGALGRPGPRGLPGPRGQNGNPG 199

  Fly   114 -------PGEKGPRGDKGHPGMPGIPGQ-----------PGPQGPPGYPGGSYPPYP---YPPPP 157
                   |||:|..|..|..|.||.||:           |||:||.|..|.:.|...   :.||.
 Worm   200 RDGQPGHPGEQGSSGQIGKIGEPGPPGEKGRDAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPG 264

  Fly   158 PPPSHGHGGPKGHQ 171
            .|.:.|..||.|.|
 Worm   265 EPGTVGPEGPSGKQ 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
sqt-1NP_001369874.1 Col_cuticle_N 8..57 CDD:198156
PHA03169 <132..>293 CDD:223003 47/147 (32%)
Collagen 170..225 CDD:396114 25/54 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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