DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14089 and col-80

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_496310.1 Gene:col-80 / 174652 WormBaseID:WBGene00000656 Length:317 Species:Caenorhabditis elegans


Alignment Length:153 Identity:62/153 - (40%)
Similarity:69/153 - (45%) Gaps:35/153 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSPAPA--PPQEVIIEEDHDHQHYHPPHYPPSYSYPYPQ--PQPCGCP--PGPPGPPGPPGQP-- 99
            |.|.||  |.|..:.         .|.|:........||  |.|.|.|  |||.||.|.||.|  
 Worm   107 GQPGPAGKPGQPGVA---------GPAHHQQQECIKCPQGAPGPAGAPGNPGPQGPNGNPGAPAH 162

  Fly   100 ----GQKGYPGPKGSKGDPGEKGPRGDKGHP--------GMPGIPGQPGPQGPPGYPG----GSY 148
                |..|.|||.|..|.||:.|..|:.|.|        |:||..|:||||||||.||    ||.
 Worm   163 GGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGST 227

  Fly   149 PPYPYPPPPPPPS--HGHGGPKG 169
            |....||.||.|:  .||.|..|
 Worm   228 PGPAGPPGPPGPNGQPGHPGQDG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
col-80NP_496310.1 Col_cuticle_N 4..56 CDD:198156
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.