DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and sqt-2

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_493635.1 Gene:sqt-2 / 173382 WormBaseID:WBGene00005017 Length:298 Species:Caenorhabditis elegans


Alignment Length:274 Identity:69/274 - (25%)
Similarity:92/274 - (33%) Gaps:114/274 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSNLEVLSANWTILLVALLSVLGGVFAKDDASVPRLITLQTGSPAPAPPQEVIIEED-------- 58
            |.:.|:....:..::|:.::|:..:     ..:|.|.:...|..:     .:|||.|        
 Worm     5 SEHKELRRVAFFAIVVSTVAVIAAI-----VILPMLYSYVAGFQS-----HLIIEADFCKTRSRD 59

  Fly    59 -----HD----------HQHYHPPHYPPSYSYPYP----QPQP--CGC------PPGPPG----- 91
                 ||          .:.|..|:.|.:..|..|    :|.|  |.|      ||||||     
 Worm    60 MWAQIHDIDGPHLFHRQKRQYSSPNPPAAGGYGAPVTNSEPAPTCCSCQQGPAGPPGPPGDDGNG 124

  Fly    92 -------------------------------PPGPPGQPGQKGYPGPKGSKGDPGEKGP------ 119
                                           ||||||..|..|..||:|.||..|:.||      
 Worm   125 GQDGVRGNDGTDGKEGSLLESAIVNEPCIICPPGPPGPQGMAGAKGPQGPKGGNGDNGPDGKAGA 189

  Fly   120 RGDKGHPGMPGIPGQPGPQGPPGYPG------GSYPPYPY-----PPPP---------------- 157
            .|.:|.|||.|.||:.|..||.|.||      |...|..:     ||.|                
 Worm   190 NGMQGPPGMMGPPGRQGVSGPKGAPGRINQINGPAGPAGHKGVRGPPGPRGEAGLDGGNSEGPQG 254

  Fly   158 PPPSHGHGGPKGHQ 171
            |....|..||.|.|
 Worm   255 PQGDAGRPGPVGEQ 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
sqt-2NP_493635.1 Col_cuticle_N 12..64 CDD:198156 9/61 (15%)
Collagen 205..265 CDD:189968 14/59 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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