DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14089 and col-7

DIOPT Version :9

Sequence 1:NP_649103.1 Gene:CG14089 / 40101 FlyBaseID:FBgn0036861 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_492090.1 Gene:col-7 / 172494 WormBaseID:WBGene00000596 Length:316 Species:Caenorhabditis elegans


Alignment Length:162 Identity:63/162 - (38%)
Similarity:71/162 - (43%) Gaps:38/162 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PA--PAPPQEVIIEEDHDHQ--HYHPPHYPPSYSYPYPQPQPC-GCPPGPPGPPGPPGQPGQK-- 102
            ||  |.|| ....::.||.|  ....|..|......:.|.|.| .||.|.|||.|.|||||.|  
 Worm    92 PAGPPGPP-GASGDKGHDGQPGQAGKPGQPGVAGPSHHQKQECIKCPQGLPGPAGVPGQPGPKGP 155

  Fly   103 ----------------GYPGPKGSKGDPGEKGPRGDKGHP--------GMPGIPGQPGPQGPPGY 143
                            |.|||.||.|.||:.|..|:.|.|        |:||..|.||||||||.
 Worm   156 NGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGA 220

  Fly   144 PG----GSYPPYPYPPPPPPPS--HGHGGPKG 169
            ||    |:.|....||.|..|:  .||.|..|
 Worm   221 PGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14089NP_649103.1 None
col-7NP_492090.1 Col_cuticle_N 5..57 CDD:198156
Collagen 100..157 CDD:189968 21/56 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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