DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14088 and psh

DIOPT Version :10

Sequence 1:NP_649100.2 Gene:CG14088 / 40098 FlyBaseID:FBgn0036858 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:234 Identity:55/234 - (23%)
Similarity:90/234 - (38%) Gaps:52/234 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GTLIHERFILTDVHCGDSIGVIRARLGEYGRIGSELAE--DH----IVAAFFSNANFNPE---TQ 115
            |:||..||:||..||.::    .|....:.|:|:...|  ||    ||   ..:...:|:   .:
  Fly   174 GSLIASRFVLTAAHCVNT----DANTPAFVRLGAVNIENPDHSYQDIV---IRSVKIHPQYVGNK 231

  Fly   116 ANNMGLMKLLRTVVYKEHIIPVCILMD-----SRMQTFADELDYFNGTTWKNSDKSPMLRSKTVI 175
            .|::.:::|.|.||..::|.|.|:..|     |..:.|.......|.||        ..|||.::
  Fly   232 YNDIAILELERDVVETDNIRPACLHTDATDPPSNSKFFVAGWGVLNVTT--------RARSKILL 288

  Fly   176 R-----------------MPQACGKLDHG----QFCAGHKDL--DSCDEPSGAALTREIDYIGPN 217
            |                 .|.:...|..|    ..||..:.|  |:|...||..|..|::.....
  Fly   289 RAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGM 353

  Fly   218 RTVLFGIANSVEVKCSNSRTYTDVVQLHQWISMVIYSSN 256
            .|::..|::...........||.|.....:|..:::..|
  Fly   354 YTIMGVISSGFGCATVTPGLYTRVSSYLDFIEGIVWPDN 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14088NP_649100.2 Tryp_SPc 42..248 CDD:473915 53/224 (24%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 54/227 (24%)
Blue background indicates that the domain is not in the aligned region.

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