DRSC/TRiP Functional Genomics Resources

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Protein Alignment Max and Usf1

DIOPT Version :9

Sequence 1:NP_001246833.1 Gene:Max / 40095 FlyBaseID:FBgn0017578 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_113965.1 Gene:Usf1 / 83586 RGDID:620974 Length:310 Species:Rattus norvegicus


Alignment Length:118 Identity:33/118 - (27%)
Similarity:59/118 - (50%) Gaps:13/118 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GDSDTGLGSSRH-----TNTANFTQAEK-RAHHNALERRRRDHIKESFTNLREAVPTLKGEKA-- 74
            |.|...:....|     :.....|:.|| ||.||.:||||||.|......|.:.:|....|..  
  Rat   172 GGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKS 236

  Fly    75 --SRAQILKKTTECIQTMRR---KISENQKDIEEIKRQNNIIAKQIQALESSN 122
              |:..||.|..:.||.:|:   ::||..:.:::::..|:::.:|::.|::.|
  Rat   237 GQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MaxNP_001246833.1 HLH 40..91 CDD:278439 21/55 (38%)
Usf1NP_113965.1 HLH 200..255 CDD:278439 20/54 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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