DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Max and usf2

DIOPT Version :9

Sequence 1:NP_001246833.1 Gene:Max / 40095 FlyBaseID:FBgn0017578 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_001116257.1 Gene:usf2 / 567297 ZFINID:ZDB-GENE-030131-8475 Length:328 Species:Danio rerio


Alignment Length:90 Identity:30/90 - (33%)
Similarity:51/90 - (56%) Gaps:7/90 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KRAHHNALERRRRDHIKESFTNLREAVPTLKGEK----ASRAQILKKTTECIQTMR---RKISEN 97
            :||.||.:||||||.|......|.:.:|....:.    ||:..||.|..:.|:.:|   :::.||
Zfish   219 RRAQHNEVERRRRDKINNWIVTLSKIIPDCNMDNTKTGASKGGILSKACDYIRELRQTNQRLQEN 283

  Fly    98 QKDIEEIKRQNNIIAKQIQALESSN 122
            .|::|.|:..|.::.:||:.|::.|
Zfish   284 YKEVERIQVDNELLRQQIEDLKNDN 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MaxNP_001246833.1 HLH 40..91 CDD:278439 19/54 (35%)
usf2NP_001116257.1 HLH 216..278 CDD:238036 20/58 (34%)
THOC7 <273..317 CDD:283305 11/36 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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