DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Max and sre2

DIOPT Version :9

Sequence 1:NP_001246833.1 Gene:Max / 40095 FlyBaseID:FBgn0017578 Length:161 Species:Drosophila melanogaster
Sequence 2:NP_595229.1 Gene:sre2 / 2541044 PomBaseID:SPBC354.05c Length:793 Species:Schizosaccharomyces pombe


Alignment Length:141 Identity:40/141 - (28%)
Similarity:65/141 - (46%) Gaps:33/141 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SMSDDDRDIDIES----DEDGDSDTGLGSSRHTNTANFTQAEKRAHHNALERRRRDHIKESFTNL 62
            |::|.:..|...:    ..:|....||.    |...|.:...||:.||.:|:|.|.::.:....|
pombe   389 SVNDSNSPISSSATFAIQSNGVEPVGLS----TQEQNLSPLSKRSAHNMIEKRYRSNLNDKIAEL 449

  Fly    63 REAVPTLK------------------GEKASRAQILKKTTECIQTMRRKISENQKDIEEIKRQNN 109
            |:|||||:                  ..|.::|.||.|.||.|::::   |:|:|.|||    |.
pombe   450 RDAVPTLRSGYNSTTADELKGTYVPLSRKLNKATILSKATEYIKSLQ---SKNKKLIEE----NK 507

  Fly   110 IIAKQIQALES 120
            |:.|::....|
pombe   508 ILQKRLSEYTS 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MaxNP_001246833.1 HLH 40..91 CDD:278439 22/68 (32%)
sre2NP_595229.1 HLH 427..496 CDD:278439 22/68 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

Return to query results.
Submit another query.