DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and ruvbl1

DIOPT Version :10

Sequence 1:NP_524156.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:XP_002933113.1 Gene:ruvbl1 / 733772 XenbaseID:XB-GENE-486361 Length:456 Species:Xenopus tropicalis


Alignment Length:182 Identity:37/182 - (20%)
Similarity:67/182 - (36%) Gaps:75/182 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 HLFG-----NLQYIYRFHRNAFLPRLLTAGNDVELIADAFVHFLDNDSFYGYVLYSMYHPKSQRL 220
            |.||     .||..|:..::.|:.        |.:|||.      .::|  |||:.::.      
 Frog     9 HDFGIQSTHYLQVNYQDSQDWFIL--------VSVIADL------RNAF--YVLFPIWF------ 51

  Fly   221 CEQHIEFFRQHQQQHGDKLGVKSLILQPI--------------QRLPRYQLLLTSLFKQ----LV 267
               |::          :.:|:|.|.:..|              || |.:.:|.|..:..    |:
 Frog    52 ---HLQ----------EAVGIKLLWVAVIGDWLNLVFKWILFGQR-PYWWVLDTDYYSNTSVPLI 102

  Fly   268 KK--------PGAISRNTQLHKVCVAEKRLQTLIGIMN---ESVTVNDILQC 308
            |:        ||....:.|   :.|.|  ...::||:.   |.::|.::..|
 Frog   103 KQFPVTCETGPGKDKADLQ---ISVLE--CHFVVGILGCAAECLSVTNLPCC 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_524156.1 TIP49 17..361 CDD:399217 37/182 (20%)
TIP49_C 366..431 CDD:436097
ruvbl1XP_002933113.1 TIP49 14..369 CDD:399217 34/177 (19%)
TIP49_C 374..439 CDD:436097
Blue background indicates that the domain is not in the aligned region.

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