DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and Ruvbl1

DIOPT Version :9

Sequence 1:NP_001262040.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_062659.1 Gene:Ruvbl1 / 56505 MGIID:1928760 Length:456 Species:Mus musculus


Alignment Length:453 Identity:206/453 - (45%)
Similarity:302/453 - (66%) Gaps:15/453 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIAGRCILLA 72
            ||:..|:.:||.:|||::|||||:...|:..:.|:|||::||.|.||:|::::..|:|||.:|||
Mouse     5 EVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLA 69

  Fly    73 GEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEETEIIEGE 137
            |.|.|||||:|:.:||.||::.||..|.|||:||.|:.|||.|.:..|::||:||||..|:.|||
Mouse    70 GPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE 134

  Fly   138 VVEI---QIERPASGTGQKVGKVT--LKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDKASGK 197
            |.|:   :.|.|..|.|:.:..|.  |||.:......|...|.|...||:::|||||.|:..||.
Mouse   135 VTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGA 199

  Fly   198 VNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHG---FLA---- 255
            |.:.||..|.|.::|....:  :|..|:|::.|:||::..||||::||.|:|..|   .|:    
Mouse   200 VKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQ 262

  Fly   256 LFSGDTGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVV 320
            |......||..::|.:||..|.::.::|.||:.|||||:|||||||||||::|:|||||.:||:|
Mouse   263 LMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIV 327

  Fly   321 VMATNRGITRIRGT-NYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALT 384
            :.|:|||...|||| :..||||||:|||||::||||:.|:.:|:|:|:|||.:.|...:..:||.
Mouse   328 IFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALN 392

  Fly   385 ILTRIATDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQDDYM 447
            .|..|.|.|:|||::||:|.|||:.:......:..|.|:::..||.|...|:|||.:.||.||
Mouse   393 HLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_001262040.1 TIP49 17..408 CDD:283678 189/403 (47%)
P-loop_NTPase 69..>113 CDD:304359 25/43 (58%)
AAA <267..358 CDD:99707 55/91 (60%)
Ruvbl1NP_062659.1 TIP49 2..455 CDD:224145 204/451 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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