DRSC/TRiP Functional Genomics Resources

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Protein Alignment rept and ruvbl2

DIOPT Version :9

Sequence 1:NP_001262040.1 Gene:rept / 40092 FlyBaseID:FBgn0040075 Length:481 Species:Drosophila melanogaster
Sequence 2:NP_777285.1 Gene:ruvbl2 / 317678 ZFINID:ZDB-GENE-030109-1 Length:463 Species:Danio rerio


Alignment Length:458 Identity:350/458 - (76%)
Similarity:413/458 - (90%) Gaps:1/458 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAETEKIEVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDARRAAGVVVQMVREGKIA 65
            :|.|:..||||:|||||||||||||||||||.||.|.||||||||..:|||||::::|:::|:||
Zfish     5 VATTKVPEVRDITRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGLILEMIKDGQIA 69

  Fly    66 GRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSGSEIYSLEMSKTEALSQALRKSIGVRIKEE 130
            ||.:|:||:|.|||||||:|:||:||.:||||:::||||:|||||||||||||.||:||||||||
Zfish    70 GRAVLIAGQPGTGKTAIAMGIAQSLGPDTPFTALAGSEIFSLEMSKTEALSQAFRKAIGVRIKEE 134

  Fly   131 TEIIEGEVVEIQIERPASGTGQKVGKVTLKTTEMETNYDLGNKIIECFMKEKIQAGDVITIDKAS 195
            |||||||||||||:|||:|||.||||:|||||||||.||||.|:||...||::|||||||||||:
Zfish   135 TEIIEGEVVEIQIDRPATGTGAKVGKLTLKTTEMETIYDLGTKMIESLSKERVQAGDVITIDKAT 199

  Fly   196 GKVNKLGRSFTRARDYDATGAQTRFVQCPEGELQKRKEVVHTVTLHEIDVINSRTHGFLALFSGD 260
            ||::||||||||||||||.||||:|||||||||||||||||||:|||||||||||.|||||||||
Zfish   200 GKISKLGRSFTRARDYDAMGAQTQFVQCPEGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGD 264

  Fly   261 TGEIKQEVRDQINNKVLEWREEGKAEINPGVLFIDEVHMLDIECFSFLNRALESDMAPVVVMATN 325
            |||||.|||:|||.||.||||||||||.|||||||||||||||||||||||||||::||::||||
Zfish   265 TGEIKSEVREQINAKVSEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDLSPVLIMATN 329

  Fly   326 RGITRIRGTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRCEEEDCIMHPDALTILTRIA 390
            |||||||||||:||||||||:|||::||.|.||:|||.::||||||||||..:..:|.|:||||.
Zfish   330 RGITRIRGTNYQSPHGIPIDMLDRLLIIATTPYTEKETRQILKIRCEEEDVELSEEAHTVLTRIG 394

  Fly   391 TDTSLRYAIQLITTANLVCRRRKATEVNTEDVKKVYSLFLDENRSSKILKEYQDDYMFSEITEEV 455
            .:||||||||||:||.||||:|:.|||..||:|:||||||||.|||:.:|||||.::|:| |:..
Zfish   395 QETSLRYAIQLISTAGLVCRKRRGTEVQVEDIKRVYSLFLDEARSSQYMKEYQDSFLFNE-TQTS 458

  Fly   456 ERD 458
            :.|
Zfish   459 QMD 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
reptNP_001262040.1 TIP49 17..408 CDD:283678 309/390 (79%)
P-loop_NTPase 69..>113 CDD:304359 30/43 (70%)
AAA <267..358 CDD:99707 76/90 (84%)
ruvbl2NP_777285.1 TIP49 21..412 CDD:283678 309/390 (79%)
P-loop_NTPase 73..>117 CDD:304359 30/43 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592530
Domainoid 1 1.000 568 1.000 Domainoid score I219
eggNOG 1 0.900 - - E1_COG1224
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4856
Inparanoid 1 1.050 706 1.000 Inparanoid score I641
OMA 1 1.010 - - QHG53744
OrthoDB 1 1.010 - - D273414at33208
OrthoFinder 1 1.000 - - FOG0004276
OrthoInspector 1 1.000 - - oto38818
orthoMCL 1 0.900 - - OOG6_101635
Panther 1 1.100 - - LDO PTHR11093
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1272
SonicParanoid 1 1.000 - - X3010
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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