DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHCHD10 and chchd10

DIOPT Version :10

Sequence 1:NP_001288268.1 Gene:CHCHD10 / 400916 HGNCID:15559 Length:149 Species:Homo sapiens
Sequence 2:XP_002940705.2 Gene:chchd10 / 100379881 XenbaseID:XB-GENE-5962008 Length:147 Species:Xenopus tropicalis


Alignment Length:152 Identity:100/152 - (65%)
Similarity:114/152 - (75%) Gaps:10/152 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRGSRSAASRPASRPA-APSAHP-PAHPPPSAAAPAPAPSGQPGLMAQMATTAAGVAVGSAVGH 63
            |.||.|||..|.||..| :|:..| ||:|||||.|.|||||..||||||||||||||||||||||
 Frog     1 MARGGRSAPPRTASSHASSPAPAPAPANPPPSALASAPAPSQGPGLMAQMATTAAGVAVGSAVGH 65

Human    64 VMGSALTGAFSGGSSEPSQPAVQQPLALYPQAPTPAAPQ--PLQMGPCAYEIRQFLDCSTTQSDL 126
            |:|.||||||||.||||::|..|:|      ..:.|.||  |...|||.||::|||||:||||||
 Frog    66 VLGGALTGAFSGSSSEPAKPVAQEP------QRSSAVPQQIPPHHGPCHYEMKQFLDCATTQSDL 124

Human   127 SLCEGFSEALKQCKYYHGLSSL 148
            :|||||||.|||||..:|:|||
 Frog   125 TLCEGFSEVLKQCKSNNGISSL 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHCHD10NP_001288268.1 CHCH 109..140 CDD:429096 24/30 (80%)
chchd10XP_002940705.2 COG3416 <35..>81 CDD:442642 39/45 (87%)
CHCH 107..140 CDD:429096 26/32 (81%)

Return to query results.
Submit another query.