DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL21 and rplU

DIOPT Version :10

Sequence 1:NP_649095.2 Gene:mRpL21 / 40091 FlyBaseID:FBgn0036853 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_417653.1 Gene:rplU / 949057 ECOCYCID:EG50001 Length:103 Species:Escherichia coli


Alignment Length:104 Identity:29/104 - (27%)
Similarity:48/104 - (46%) Gaps:3/104 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LFAVVHLCGKQFKVTPGDIILVEGYWPPTIGDEISLDKVLLAGARDFTLVGRPILEPGLILVKAT 142
            ::||....|||.:|:.|..:.:|.....| |:.:...:||:....:...:|.|.::.|:|  ||.
E. coli     1 MYAVFQSGGKQHRVSEGQTVRLEKLDIAT-GETVEFAEVLMIANGEEVKIGVPFVDGGVI--KAE 62

  Fly   143 VVEKTLSHTKTHFRKKRRKQYMRINFQRSPHTMVRINSI 181
            ||...........:.:|||.|.:....|...|.|:|..|
E. coli    63 VVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGI 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL21NP_649095.2 Ribosomal_L21p 79..181 CDD:459952 28/101 (28%)
rplUNP_417653.1 rplU 1..103 CDD:235510 29/104 (28%)

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