DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL21 and mrpl-21

DIOPT Version :10

Sequence 1:NP_649095.2 Gene:mRpL21 / 40091 FlyBaseID:FBgn0036853 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001022585.1 Gene:mrpl-21 / 3565999 WormBaseID:WBGene00023422 Length:171 Species:Caenorhabditis elegans


Alignment Length:180 Identity:56/180 - (31%)
Similarity:100/180 - (55%) Gaps:23/180 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFLAQTMRQMLRHVPNRSLLTAGAMRPLSISPVIGQQNKPATESVDLSAIAKDQQKECLSICERI 66
            |.|..:.:.:||    ||:.:|.          :|..::  .:.:|...:.|:       :.:.|
 Worm     8 SLLLSSSQSILR----RSIQSAS----------VGTSSE--AQVIDTEQVQKE-------VFKSI 49

  Fly    67 NRQVQKSEQGRLFAVVHLCGKQFKVTPGDIILVEGYWPPTIGDEISLDKVLLAGARDFTLVGRPI 131
            :.:|.:.::.||||||::.|:|:||:.||:|.:||..|..:||||.|:|||:.|..:|:|.|||:
 Worm    50 SDEVNEEKRQRLFAVVYVNGRQWKVSDGDLINMEGNLPLNVGDEIKLEKVLMVGGTNFSLFGRPL 114

  Fly   132 LEPGLILVKATVVEKTLSHTKTHFRKKRRKQYMRINFQRSPHTMVRINSI 181
            |:...:.|.|.||||..::.:.|:......|...:|::....|::||.|:
 Worm   115 LDASAVTVDAVVVEKKTTNPELHYVHLNHHQTKFLNWKSDEATVLRIKSV 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL21NP_649095.2 Ribosomal_L21p 79..181 CDD:459952 41/101 (41%)
mrpl-21NP_001022585.1 DUF6259 <43..>76 CDD:437605 13/39 (33%)
Ribosomal_L21p 62..>129 CDD:459952 33/66 (50%)

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