DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL21 and aco2

DIOPT Version :10

Sequence 1:NP_649095.2 Gene:mRpL21 / 40091 FlyBaseID:FBgn0036853 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_596189.3 Gene:aco2 / 2541348 PomBaseID:SPBP4H10.15 Length:918 Species:Schizosaccharomyces pombe


Alignment Length:124 Identity:35/124 - (28%)
Similarity:66/124 - (53%) Gaps:9/124 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 INRQVQKS--EQGRLFAVVHLCGKQFKVTPGDII----LVEGYWPPTIGDEISLDKVLLAGARDF 124
            :|::|..|  :|...:|..::..:.|.:..||.:    .::|.   .:||.|.|||:...|:|||
pombe   797 VNQKVIDSIKQQPDHYADAYIFNRHFVIAKGDQLGLPFHLKGV---QVGDTIRLDKIASFGSRDF 858

  Fly   125 TLVGRPILEPGLILVKATVVEKTLSHTKTHFRKKRRKQYMRINFQRSPHTMVRINSIEL 183
            ||.|.|.::|.|..::|.|:....|......:.|||.::.|:...:..:|::|:..::|
pombe   859 TLFGNPYVDPSLFTIEAVVLSFPKSALSVRVKHKRRHRHDRVMKHKQTYTILRVTELKL 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL21NP_649095.2 Ribosomal_L21p 79..181 CDD:459952 30/105 (29%)
aco2NP_596189.3 aconitase_mito 44..788 CDD:273561
Ribosomal_L21p 812..914 CDD:459952 30/104 (29%)
Blue background indicates that the domain is not in the aligned region.

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