DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz2 and Fzd4

DIOPT Version :10

Sequence 1:NP_001401042.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_072145.1 Gene:Fzd4 / 64558 RGDID:71017 Length:538 Species:Rattus norvegicus


Alignment Length:633 Identity:237/633 - (37%)
Similarity:326/633 - (51%) Gaps:151/633 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RLKVLILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLDASPAPGYGVPVIPKDPNLRCEEITI 69
            ||.:|:|.|:||                            ..||.|:|     .:...||:.|.|
  Rat    20 RLGLLLLQLLLL----------------------------QRPALGFG-----DEEERRCDPIRI 51

  Fly    70 PMCRGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYHKPLP 134
            .||:.:|||:|..||.:.||.|.:|.|::..|.||::..||..|:|||||:|.|:|.|..:.|:.
  Rat    52 AMCQNLGYNVTKMPNLVGHELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIG 116

  Fly   135 VCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSG 199
            .|..:|...:..|.|:::::.|.||:.:.|...|...|.:::|||.|...|.             
  Rat   117 PCGGMCLSVKRRCEPVLKEFGFAWPDSLNCSKFPPQNDHNHMCMEGPGDEEV------------- 168

  Fly   200 SGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKA---SGKEC-SCSCRSP 260
                                                       |...|.   .|:|| |....|.
  Rat   169 -------------------------------------------PLPHKTPIQPGEECHSVGTNSD 190

  Fly   261 LIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPC--KGPFFSNDEKDFAGLWIAL 323
            .....|..|                             ||.:.|  ....:|...|:|..:|:|:
  Rat   191 QYIWVKRSL-----------------------------NCVLKCGYDAGLYSRSAKEFTDIWMAV 226

  Fly   324 WSGLCFCSTLMTLTTFIIDTERFKYPERPIVFLSACYFMVAVGYLSRNFLQNEEIACD------G 382
            |:.|||.||..|:.||:||:.||.||||||:|||.||.:.::.|:.|..:..|.|:||      .
  Rat   227 WASLCFISTTFTVLTFLIDSSRFSYPERPIIFLSMCYNIYSIAYIVRLTVGRERISCDFEEAAEP 291

  Fly   383 LLLRE--SSTGPHSCTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFHLAAW 445
            :|::|  .:||   |.::|||.||||||||||||||:.|||||||||||:|||..||.|||:|||
  Rat   292 VLIQEGLKNTG---CAIIFLLMYFFGMASSIWWVILTLTWFLAAGLKWGHEAIEMHSSYFHIAAW 353

  Fly   446 LIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSLFRIR 510
            .||.|:::.:|::..||.|.:.|:|||||.:.|.|..||:||||.||||||.|:.||.|:||:||
  Rat   354 AIPAVKTIVILIMRLVDADELTGLCYVGNQSLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIR 418

  Fly   511 SVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKALACPCAQVK 575
            |.:::.     |.|.||||:||::||:||||||||||.||.||.||   ..:|        |..:
  Rat   419 SNLQKD-----GTKTDKLERLMVKIGVFSVLYTVPATCVIACYFYE---ISNW--------ALFR 467

  Fly   576 GPGKKPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRRLLGA 623
            ........:|.|||.||:|.||||||:||||.|||.:|::...||:.:
  Rat   468 YSADDSNMAVEMLKIFMSLLVGITSGMWIWSAKTLHTWQKCSNRLVNS 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001401042.1 CRD_FZ5_like 63..182 CDD:143565 46/118 (39%)
7tmF_FZD5_FZD8-like 307..618 CDD:320163 164/318 (52%)
TM helix 1 316..341 CDD:320163 12/24 (50%)
TM helix 2 350..371 CDD:320163 10/20 (50%)
TM helix 3 396..422 CDD:320163 19/25 (76%)
TM helix 4 439..455 CDD:320163 9/15 (60%)
TM helix 5 477..506 CDD:320163 18/28 (64%)
TM helix 6 531..558 CDD:320163 20/26 (77%)
TM helix 7 579..604 CDD:320163 13/24 (54%)
Fzd4NP_072145.1 CRD_FZ4 43..168 CDD:143557 47/124 (38%)
7tmF_FZD4 210..510 CDD:320166 164/318 (52%)
TM helix 1 219..244 CDD:320166 12/24 (50%)
TM helix 2 253..274 CDD:320166 10/20 (50%)
TM helix 3 304..330 CDD:320166 19/25 (76%)
TM helix 4 347..363 CDD:320166 9/15 (60%)
TM helix 5 385..414 CDD:320166 18/28 (64%)
TM helix 6 434..461 CDD:320166 20/29 (69%)
TM helix 7 471..496 CDD:320166 13/24 (54%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 500..505 3/4 (75%)
PDZ-binding 536..538
Blue background indicates that the domain is not in the aligned region.

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