DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz2 and Corin

DIOPT Version :10

Sequence 1:NP_001401042.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_058565.2 Gene:Corin / 53419 MGIID:1349451 Length:1113 Species:Mus musculus


Alignment Length:426 Identity:86/426 - (20%)
Similarity:132/426 - (30%) Gaps:178/426 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GVPVIPKDPNL----RCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGL--EVHQFWPLVEIKCS 110
            |..:...|.:|    :||.||:.:|..:.||.|.:||.:.|.||.||.:  |...|..||:..|.
Mouse   507 GSSLCDSDSSLSNCSQCEPITLELCMNLPYNHTHYPNYLGHRTQKEASISWESSLFPALVQTNCY 571

  Fly   111 PDLKFFLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDN 175
            ..|.||.|::..|.|..:..:.:|.||.:||.::..|..::.....:|||...|...|.....:.
Mouse   572 KYLMFFACTILVPKCDVNTGQRIPPCRLLCEHSKERCESVLGIVGLQWPEDTDCNQFPEESSDNQ 636

  Fly   176 LCM------EQ--PSYTEAGSGGSSGGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPC 232
            .|:      |:  ||:.:..||....||                                  :.|
Mouse   637 TCLLPNEDVEECSPSHFKCRSGRCVLGS----------------------------------RRC 667

  Fly   233 RGRNSKNCQNPQGEKASGKECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIA-- 295
            .|:  .:|.:...|:      :|.|        ||:.|              |......|.:.  
Mouse   668 DGQ--ADCDDDSDEE------NCGC--------KERAL--------------WECPFNKQCLKHT 702

  Fly   296 ----GVPNCGIPCKGPFFSNDEKDFAGLWIALWSGLCFCSTLMTLTTFIIDTERFKYPERPIVFL 356
                |.|:|.       .|.|||:              ||                         
Mouse   703 LICDGFPDCP-------DSMDEKN--------------CS------------------------- 721

  Fly   357 SACYFMVAVGYLSRNFLQNEEIACDGLLLRESSTGPHSCTLVFLLTYFFGMASSIW---WVILSF 418
                           |.|:.|:.|          ..|.|           :...:|   ||..|.
Mouse   722 ---------------FCQDNELEC----------ANHEC-----------VPRDLWCDGWVDCSD 750

  Fly   419 T---WFLAAGLKWGNEA----ITKHSQYFHLAA--W 445
            :   |......|.||.:    :.|.::..|:.|  |
Mouse   751 SSDEWGCVTLSKNGNSSSLLTVHKSAKEHHVCADGW 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001401042.1 CRD_FZ5_like 63..182 CDD:143565 39/128 (30%)
7tmF_FZD5_FZD8-like 307..618 CDD:320163 24/151 (16%)
TM helix 1 316..341 CDD:320163 2/24 (8%)
TM helix 2 350..371 CDD:320163 0/20 (0%)
TM helix 3 396..422 CDD:320163 5/31 (16%)
TM helix 4 439..455 CDD:320163 3/9 (33%)
TM helix 5 477..506 CDD:320163
TM helix 6 531..558 CDD:320163
TM helix 7 579..604 CDD:320163
CorinNP_058565.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..202
CRD_corin_1 202..331 CDD:143554
LDLa 337..372 CDD:238060
LDLa 374..408 CDD:238060
Ldl_recept_a 415..445 CDD:395011
LDLa 455..482 CDD:238060
CRD_corin_2 522..643 CDD:143579 38/120 (32%)
Ldl_recept_a 648..682 CDD:395011 10/75 (13%)
LDLa <695..720 CDD:238060 8/45 (18%)
LDLa 723..757 CDD:238060 10/54 (19%)
SR 758..853 CDD:214555 7/29 (24%)
Tryp_SPc 869..1100 CDD:238113
Blue background indicates that the domain is not in the aligned region.

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