DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz2 and fzd6

DIOPT Version :10

Sequence 1:NP_001401042.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_956855.2 Gene:fzd6 / 393533 ZFINID:ZDB-GENE-040426-1451 Length:617 Species:Danio rerio


Alignment Length:646 Identity:204/646 - (31%)
Similarity:287/646 - (44%) Gaps:174/646 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLDASPAPGYGVPVIPKDPNLRCEEITIPMC 72
            :|.|.::|||.||.:                  |.|                  ..||.:.:..|
Zfish     4 LLCLCVLLLLESCVS------------------HTL------------------FTCEPVQVQWC 32

  Fly    73 RGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYHKP----- 132
            ..:.||.|.|||.:.|..||.|.:.:.:|.|||.::||||...|||..:.|.|....|..     
Zfish    33 LDMPYNTTFFPNMLEHYDQDIAAVRMKEFMPLVSVRCSPDAHLFLCQAFVPECRTHTHSQTHTHV 97

  Fly   133 LPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGG 197
            |..||..|||.||.|..:|..:...||..:.||.|.                      |.|||..
Zfish    98 LRPCRERCERVRSDCRAVMHTFDISWPSELQCERLE----------------------SCGGSAV 140

  Fly   198 SGSGSGSGGKRKQGGSGSGGSGAG-----------GSSGSTSTKPCRGRNSKNCQNPQGEKASGK 251
            ..:.:|      :.|:||.....|           |.|||                         
Zfish   141 DVTTAG------RSGAGSSPRDLGFWCPLQLKLRPGQSGS------------------------- 174

  Fly   252 ECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFSNDEKDF 316
                       ||                               |.|:|..||:..|.:..|:..
Zfish   175 -----------FL-------------------------------GAPDCAPPCENMFLTAAEQHL 197

  Fly   317 AGLWIALWSGLCFCSTLMTLTTFIIDTERFKYPERPIVFLSACYFMVAVGYLSRNFLQNEEIACD 381
            |.|:|.:.|.:|.|:||.|..||::|.:||:||||||||:|.||..|::.|| ..|:....:||.
Zfish   198 ARLFIGVCSVVCLCATLFTFLTFLMDAQRFRYPERPIVFISVCYCAVSLLYL-LGFMLGPSVACG 261

  Fly   382 G---------LLLRESSTGPHSCTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHS 437
            .         ::|...|.|   |:|:|.|.||...|..:|||||:.|||||||.||..|||.|.:
Zfish   262 APGRPGGVWTVVLGARSRG---CSLLFTLLYFCSTAGMLWWVILTITWFLAAGPKWSCEAIQKQA 323

  Fly   438 QYFHLAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAG 502
            .:||.|.|.:|.|.::.:|.|..|:||.|.|:|:.|..:...|:.|::|||.:.:::|...|:||
Zfish   324 LWFHAAGWGVPAVLTLLLLALGKVEGDGISGVCFTGLYDLTALRWFLVAPLALAVLLGLALLLAG 388

  Fly   503 FVSLFRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYE----AAYFEDW 563
            .|:|.|:|.||:..     .:...||::.|||||:||.||.:|..:::||||||    ..:...|
Zfish   389 IVALNRVRQVIQHD-----QLNQQKLKRFMIRIGVFSGLYLLPLLLLLGCYLYEMTQRRVWESSW 448

  Fly   564 I----KALACPCAQVKGPG-KKPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRR 619
            :    :..:.|||:....| :.|..|:.:|||.|.|||||.:..|:.|.||...|..|.||
Zfish   449 VNRHCQEFSIPCARTSSGGVQHPGLSLFLLKYLMTLAVGIPAVFWVSSRKTCSRWASFCRR 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001401042.1 CRD_FZ5_like 63..182 CDD:143565 42/123 (34%)
7tmF_FZD5_FZD8-like 307..618 CDD:320163 131/328 (40%)
TM helix 1 316..341 CDD:320163 11/24 (46%)
TM helix 2 350..371 CDD:320163 12/20 (60%)
TM helix 3 396..422 CDD:320163 13/25 (52%)
TM helix 4 439..455 CDD:320163 6/15 (40%)
TM helix 5 477..506 CDD:320163 10/28 (36%)
TM helix 6 531..558 CDD:320163 16/30 (53%)
TM helix 7 579..604 CDD:320163 11/24 (46%)
fzd6NP_956855.2 None

Return to query results.
Submit another query.