DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz2 and Fzd10

DIOPT Version :9

Sequence 1:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001258121.1 Gene:Fzd10 / 363913 RGDID:1583825 Length:582 Species:Rattus norvegicus


Alignment Length:679 Identity:274/679 - (40%)
Similarity:349/679 - (51%) Gaps:163/679 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLDASPAPGYGVPVIPKDPNLRCEEITIPMCR 73
            |.|.|.:::.||.|   :.|.|               ...||.|          :|:.:.||||:
  Rat     8 LWLMLQVMMGSCAA---ISSMD---------------LERPGDG----------KCQPVEIPMCK 44

  Fly    74 GIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYHKPLPVCRS 138
            .||||.|..||.|.||.|.||.:::|:|.||||..|...|:|||||:|.|:|.|....|:|.||.
  Rat    45 DIGYNTTRMPNLMGHENQREAAIQLHEFAPLVEYGCHGHLRFFLCSLYAPMCTEQVSTPIPACRV 109

  Fly   139 VCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSG---- 199
            :||:||..|:|||:|:.|.||:.:.|..||...||:.||||.|      :.||...|.|||    
  Rat   110 MCEQARLKCSPIMEQFKFRWPDSLDCSKLPNKNDPNYLCMEAP------NNGSDEPSRGSGMFPP 168

  Fly   200 ------SGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASGK----ECS 254
                  ..|......|.||.|..|                      |.||      ||    |.|
  Rat   169 LFRPQRPHSAQEHPLKDGGPGRAG----------------------CDNP------GKFHHVEKS 205

  Fly   255 CSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFSNDEKDFAGL 319
            .||                                       .|.| .|....::|.|:|.||.:
  Rat   206 ESC---------------------------------------APLC-TPGVDVYWSRDDKRFAVV 230

  Fly   320 WIALWSGLCFCSTLMTLTTFIIDTERFKYPERPIVFLSACYFMVAVGYLSRNFLQNEEIACDGLL 384
            |:|:||.|||.|:..|:.||:||..||:||||||:|||.||.:.:|||:.|.|...|.||||   
  Rat   231 WLAIWSVLCFFSSAFTVLTFLIDPSRFRYPERPIIFLSMCYCVYSVGYIIRLFAGAESIACD--- 292

  Fly   385 LRES-----------STGPHSCTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQ 438
             |:|           |||   ||||||:.|:||||||:|||:|:.|||||||.|||:|||..:|.
  Rat   293 -RDSGQLYVIQEGLESTG---CTLVFLVLYYFGMASSLWWVVLTLTWFLAAGRKWGHEAIEANSS 353

  Fly   439 YFHLAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGF 503
            |||||||.||.|:::.:|::..|.||.:.|:||||:::.:.|..|||.||..||||||:|:::||
  Rat   354 YFHLAAWAIPAVKTILILVMRRVAGDELTGVCYVGSMDVNALTGFVLVPLACYLVIGTSFILSGF 418

  Fly   504 VSLFRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKALA 568
            |:||.||.|:|.     .|...|||||||:|||:||:|||||||.||.||.||....:.| |.||
  Rat   419 VALFHIRRVMKT-----GGENTDKLEKLMVRIGVFSLLYTVPATCVIACYFYERLNMDYW-KMLA 477

  Fly   569 -------------CPCAQVKGPGKKPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRRL 620
                         ..|....   ..|...|.|:|..|.|.||||||||:|:.|||:||::...|.
  Rat   478 TQHKCKTNNQTKTADCLMTT---SIPAVEVFMVKVSMLLVVGITSGVWVWTSKTLQSWQQVCSRG 539

  Fly   621 LGAPDR-------TGANQALIKQRPPIPH 642
            |....|       |.|......|.|..||
  Rat   540 LKRKSRRKPASVVTSAGIYKKAQHPQKPH 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 60/118 (51%)
Frizzled 308..618 CDD:279827 169/333 (51%)
Fzd10NP_001258121.1 CRD_FZ 31..157 CDD:295308 64/141 (45%)
Frizzled 219..536 CDD:279827 169/332 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D237456at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.