DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz2 and smo

DIOPT Version :10

Sequence 1:NP_001401042.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_523443.1 Gene:smo / 33196 FlyBaseID:FBgn0003444 Length:1036 Species:Drosophila melanogaster


Alignment Length:581 Identity:138/581 - (23%)
Similarity:242/581 - (41%) Gaps:138/581 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CRG--IGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEI-KCSPDLKFFLCSMYTPICL----ED- 128
            |.|  :.|.::|. :..:..|:.|...:::.::.|..: ||...::.|||:::.|.|.    || 
  Fly   100 CFGSKLPYELSSL-DLTDFHTEKELNDKLNDYYALKHVPKCWAAIQPFLCAVFKPKCEKINGEDM 163

  Fly   129 -YHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSS 192
             |.....:||...|..|     |:...:| :|:.:.|..                 |...:..::
  Fly   164 VYLPSYEMCRITMEPCR-----ILYNTTF-FPKFLRCNE-----------------TLFPTKCTN 205

  Fly   193 GGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASGKECSCSC 257
            |..|...:|:|                                                    .|
  Fly   206 GARGMKFNGTG----------------------------------------------------QC 218

  Fly   258 RSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFSNDEKDFAGLWIA 322
            .|||:          .:.....::|             |:..||:.||.|.:::||.......|.
  Fly   219 LSPLV----------PTDTSASYYP-------------GIEGCGVRCKDPLYTDDEHRQIHKLIG 260

  Fly   323 LWSG-LCFCSTLMTLTTFIIDTERF-KYPERPIVFLSACYFMVAVGYLSRNFLQ-----NEEIAC 380
             |:| :|..|.|..::||.||.:.. |||...:.:::.|:.:..||:|    ||     .|:|.|
  Fly   261 -WAGSICLLSNLFVVSTFFIDWKNANKYPAVIVFYINLCFLIACVGWL----LQFTSGSREDIVC 320

  Fly   381 --DGLLLRESSTGPH--SCTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFH 441
              ||.|.....|...  ||.::|:|.|:|..|..:|:|.|::.|...| :....:.|.|...|||
  Fly   321 RKDGTLRHSEPTAGENLSCIVIFVLVYYFLTAGMVWFVFLTYAWHWRA-MGHVQDRIDKKGSYFH 384

  Fly   442 LAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSL 506
            |.||.:|.|.::..:..|.|||:.|:|||:||.:|.......:|.||...::||..|:..|.|.|
  Fly   385 LVAWSLPLVLTITTMAFSEVDGNSIVGICFVGYINHSMRAGLLLGPLCGVILIGGYFITRGMVML 449

  Fly   507 FRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKA----L 567
            |.::..........|   ::|:..:::|:|:.::|..|...:.|.|::.|..:.::|.::    :
  Fly   450 FGLKHFANDIKSTSA---SNKIHLIIMRMGVCALLTLVFILVAIACHVTEFRHADEWAQSFRQFI 511

  Fly   568 ACPCAQV---KGPGK---KPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRRLLG 622
            .|..:.|   |...:   :|...||.|......:.||....|.|:..::|:|:|:.|:..|
  Fly   512 ICKISSVFEEKSSCRIENRPSVGVLQLHLLCLFSSGIVMSTWCWTPSSIETWKRYIRKKCG 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001401042.1 CRD_FZ5_like 63..182 CDD:143565 25/118 (21%)
7tmF_FZD5_FZD8-like 307..618 CDD:320163 96/331 (29%)
TM helix 1 316..341 CDD:320163 8/25 (32%)
TM helix 2 350..371 CDD:320163 4/20 (20%)
TM helix 3 396..422 CDD:320163 9/25 (36%)
TM helix 4 439..455 CDD:320163 8/15 (53%)
TM helix 5 477..506 CDD:320163 8/28 (29%)
TM helix 6 531..558 CDD:320163 7/26 (27%)
TM helix 7 579..604 CDD:320163 6/27 (22%)
smoNP_523443.1 CRD_SMO 86..221 CDD:143560 31/196 (16%)
7tmF_SMO_homolog 245..568 CDD:320158 96/331 (29%)
TM helix 1 254..279 CDD:320158 8/25 (32%)
TM helix 2 289..310 CDD:320158 5/24 (21%)
TM helix 3 340..366 CDD:320158 9/25 (36%)
TM helix 4 382..398 CDD:320158 8/15 (53%)
TM helix 5 420..449 CDD:320158 8/28 (29%)
TM helix 6 471..498 CDD:320158 7/26 (27%)
TM helix 7 529..554 CDD:320158 6/24 (25%)

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