DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fz2 and lin-17

DIOPT Version :9

Sequence 1:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001021813.1 Gene:lin-17 / 171832 WormBaseID:WBGene00003006 Length:558 Species:Caenorhabditis elegans


Alignment Length:568 Identity:164/568 - (28%)
Similarity:254/568 - (44%) Gaps:103/568 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLE 127
            :|..|.|.:|:.:.||.|.|||.:.|..|.........|.||::.||.|.:.||:||::.|:|..
 Worm    27 KCIPIDIELCKDLPYNYTYFPNTILHNDQHTLQTHTEHFKPLMKTKCHPHIHFFICSVFAPMCPI 91

  Fly   128 DYHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSS 192
            ...:.:..|:||||:.::.|..|::::...|||.:.|...|   ||..||| :|:..|...|.|:
 Worm    92 GMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLNCAQFP---DPPELCM-KPTEDEITGGFSA 152

  Fly   193 GGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQGEKASGKECSCSC 257
            ......|                        |.|:|:||                       ..|
 Worm   153 PRLPTKG------------------------SSSSSSKP-----------------------TGC 170

  Fly   258 RSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCK-GPFFSNDEKDFAGLWI 321
            .|.|:.:..             |.|.              .:|...|: ...||.|.|.....| 
 Worm   171 PSDLVDVDP-------------HDPK--------------SHCAFACQSNVMFSTDNKRMVRSW- 207

  Fly   322 ALW-----SGLCFCSTLMTLTTFIIDTERFKYPERPIVFLSACYFMVAVGYLSRNFLQNEEIACD 381
            ::|     :|:    .|.:..||.||.:||::|||.:.:||.|.|:.::.||:..|:.....:|.
 Worm   208 SIWFAAANAGV----ALFSFLTFAIDRKRFRFPERCVFYLSLCIFISSLPYLTPLFIDAPIRSCH 268

  Fly   382 GLLLRES--STGPHS---CTLVFLLTYFFGMASSIWWVILSFTWFLAAGLKWGNEAITKHSQYFH 441
            .|....|  |.|...   |...|||.|||..|:::||::.|||.:|:.|.||..|.|...|.|.|
 Worm   269 ALGNGRSYLSIGTFDNSYCLASFLLNYFFSTAAALWWLMFSFTLYLSGGRKWVPEGIEACSSYVH 333

  Fly   442 LAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSL 506
            ..||.:.::.::.||:.:.||...:..:|.|||||...|..||:.|..:.:||||.|::.||.|:
 Worm   334 FVAWGLSSLATIIVLIFNKVDASELTALCSVGNLNSIALLWFVIVPRTICIVIGTCFIVGGFASM 398

  Fly   507 FRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKALACPC 571
            .|.|...:.:     |....||||||:::|.|..|:.:|..|.:.|..|:......|.: :...|
 Worm   399 CRERISFRTR-----GTDTSKLEKLMVKMGFFCALFILPNVIELVCQCYKFMILTQWTR-MTIDC 457

  Fly   572 AQVKGPGKKPL---YSVLMLKYFMALAVGITSGVWIWSGKTLESWRRF 616
            .|..|...:|.   ..:.|.....:||.|.:..:|:.|.||:.:|:.|
 Worm   458 KQQSGACHRPTPPQAEIYMTAVISSLATGFSCLMWVLSAKTVHAWKNF 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 41/118 (35%)
Frizzled 308..618 CDD:279827 106/322 (33%)
lin-17NP_001021813.1 CRD_LIN_17 25..144 CDD:143563 42/120 (35%)
Frizzled 195..506 CDD:279827 106/322 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2842
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.860

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