DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz2 and smo

DIOPT Version :9

Sequence 1:NP_001262037.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_002931911.2 Gene:smo / 100491644 XenbaseID:XB-GENE-487420 Length:815 Species:Xenopus tropicalis


Alignment Length:603 Identity:153/603 - (25%)
Similarity:258/603 - (42%) Gaps:156/603 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 CEEITIPMCRG--IGYNMTSFPNEMNHETQDEAGLEVHQ---FW------PLVEIKCSPDLKFFL 117
            ||.:...:|.|  :.|.:||.....:..||:    |:|.   .|      |    :|...::..|
 Frog    43 CEPLKYNVCLGSVLPYALTSTVLAEDSSTQE----EIHDKLLLWSGLRNAP----RCWDAIRPLL 99

  Fly   118 CSMYTPICLEDYHKPLPVCRSVCERARSGCAPIMQQYSFEWPERMAC--EHLPLHGDPDNLCMEQ 180
            |::|.|.| |.....|| .:|:|:..|..||.:.::..  ||:.:.|  :|.|      :.|..:
 Frog   100 CAVYMPKC-EGGKVELP-SQSLCQTTRVPCAIVARERG--WPDFLKCTTDHFP------DGCSNE 154

  Fly   181 PSYTEAGSGGSSGGSGGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRGRNSKNCQNPQG 245
            ....:..|.|                                                       
 Frog   155 IQTVKFNSSG------------------------------------------------------- 164

  Fly   246 EKASGKECSCSCRSPLIFLGKEQLLQQQSQMPMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFS 310
                      .|.:||:               ...:|..||.:        |..|||.|:.|.|:
 Frog   165 ----------QCEAPLV---------------RTDNPKSWYED--------VEGCGIQCQNPLFT 196

  Fly   311 NDEKDFAGLWIALWSGLCFCSTLMTLTTFIIDTERF-KYPERPIVFLSACYFMVAVGYLSRNFLQ 374
            ..|.....::||::|.:....|..||.||:.|.:.. :||...:.:::||:|:.::|:|:: |:.
 Frog   197 KKEHREMHVYIAIFSSVTIFCTFFTLATFLSDWKNSNRYPAVILFYVNACFFVGSIGWLAQ-FMD 260

  Fly   375 --NEEIACDG---LLLRE-SSTGPHSCTLVFLLTYFFGMASSIWWVILSFTW---FLAAGLKWGN 430
              .:||.|.|   :.|.| :|....||.::|::.|:..|:..||:|:|::.|   |.|.|..  :
 Frog   261 GARDEIVCRGDGTMRLGEPTSNETLSCVIIFVIVYYAMMSGVIWFVMLTYAWHTSFKALGTT--H 323

  Fly   431 EAITKHSQYFHLAAWLIPTVQSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIG 495
            :.::..:.||||..|.||.|.:||:|.::.||||.:.|||:||..|..:...|||||:.:.|::|
 Frog   324 QPLSGKTSYFHLITWSIPFVLTVAILAVAQVDGDSVSGICFVGYKNYHYRAGFVLAPIGLVLIVG 388

  Fly   496 TTFLMAGFVSLFRIRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYF 560
            ..||:.|.::||.|:|   ...|:.:...|.|:.:.|:|:|||..|......|..||:.|:....
 Frog   389 GYFLIRGVMTLFSIKS---NHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQ 450

  Fly   561 EDWIKA----LAC--------------PCAQVKGPGKKPLYSVLMLKYFMALAVGITSGVWIWSG 607
            .:|.::    :.|              |..::|   .:|...|..:..|.....||:...|:|:.
 Frog   451 AEWERSFREYVLCEANVTIAEQTNKPIPECEIK---NRPSLLVEKINLFAMFGTGISMSTWVWTK 512

  Fly   608 KTLESWRRFWRRLLGAPD 625
            .|:..|:|.|.|:||..|
 Frog   513 ATIIIWKRAWCRILGRSD 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001262037.1 CRD_FZ5_like 63..182 CDD:143565 33/130 (25%)
Frizzled 308..618 CDD:279827 101/337 (30%)
smoXP_002931911.2 CRD_SMO 39..169 CDD:143560 36/208 (17%)
7tmF_SMO_homolog 193..523 CDD:320158 102/338 (30%)
TM helix 1 202..227 CDD:320158 8/24 (33%)
TM helix 2 237..258 CDD:320158 5/21 (24%)
TM helix 3 288..314 CDD:320158 8/25 (32%)
TM helix 4 332..348 CDD:320158 9/15 (60%)
TM helix 5 370..399 CDD:320158 10/28 (36%)
TM helix 6 421..448 CDD:320158 10/26 (38%)
TM helix 7 484..509 CDD:320158 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D509772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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