DRSC/TRiP Functional Genomics Resources

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Protein Alignment fz2 and smo

DIOPT Version :10

Sequence 1:NP_001401042.1 Gene:fz2 / 40090 FlyBaseID:FBgn0016797 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_002931911.2 Gene:smo / 100491644 XenbaseID:XB-GENE-487420 Length:815 Species:Xenopus tropicalis


Alignment Length:93 Identity:23/93 - (24%)
Similarity:36/93 - (38%) Gaps:29/93 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SDRLEMDMKSMGSI--YYE-----------NFAFPGMVPFKRSAGEKSGIPVYQPGATY------ 160
            |.::.|:|...|.:  :|.           |.:|..:|.:...:|: :.|.|.|.|..|      
 Frog    97 SAQVPMNMTITGCMLTFYRKTPTVVFWQWVNQSFNAIVNYSNRSGD-TPITVRQLGTAYVSATTG 160

  Fly   161 --QQLMQLQQPFVPVSFTGH-PPGVPRF 185
              ...:.|:      |.|.| ||.|.||
 Frog   161 AVATALGLK------SLTKHLPPLVGRF 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fz2NP_001401042.1 CRD_FZ5_like 63..182 CDD:143565 20/88 (23%)
7tmF_FZD5_FZD8-like 307..618 CDD:320163
TM helix 1 316..341 CDD:320163
TM helix 2 350..371 CDD:320163
TM helix 3 396..422 CDD:320163
TM helix 4 439..455 CDD:320163
TM helix 5 477..506 CDD:320163
TM helix 6 531..558 CDD:320163
TM helix 7 579..604 CDD:320163
smoXP_002931911.2 CRD_SMO 39..169 CDD:143560 14/72 (19%)
7tmF_SMO_homolog 193..523 CDD:320158
TM helix 1 202..227 CDD:320158
TM helix 2 237..258 CDD:320158
TM helix 3 288..314 CDD:320158
TM helix 4 332..348 CDD:320158
TM helix 5 370..399 CDD:320158
TM helix 6 421..448 CDD:320158
TM helix 7 484..509 CDD:320158
Blue background indicates that the domain is not in the aligned region.

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