DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gem2 and gemin2

DIOPT Version :10

Sequence 1:NP_649092.1 Gene:Gem2 / 40087 FlyBaseID:FBgn0036850 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001096228.1 Gene:gemin2 / 100124782 XenbaseID:XB-GENE-941786 Length:267 Species:Xenopus tropicalis


Alignment Length:269 Identity:77/269 - (28%)
Similarity:115/269 - (42%) Gaps:33/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQHEPEDQTFQLQALEICEPDSSFDPQKPPESGEEYLMHMFYERKRCPAVVTKRSSKIRNNTGNT 65
            |...||:...:|..:..|:....|||..||.:.:|||..:..|..|||.||..:....:.....|
 Frog     1 MDSGPEELMPRLLPVGNCDLPEDFDPAVPPRTPQEYLRRVQIEAARCPDVVIAQIDPKKLRKKQT 65

  Fly    66 TLEMLDNPELPPFKCLLPTPEWRDEQVKSFQAARSQVLVLRKELANNNYDQSGEPPLTSDQEKWK 130
            ....|...:..| :...|:..|:.:||..|.|.|..:...|....:...|.:...|.|.|:|.||
 Frog    66 VSISLSGCQPAP-EGYSPSLRWQQQQVAQFSAVRQSLHKHRSHWRSQPLDSNVTMPSTEDEESWK 129

  Fly   131 EFCRNQQ--------------------------PLLSTLLHLTQNDLELLLEMLSKWLQDPNTTV 169
            :||..::                          ||||.:..::|..:..:||.|..|.::.|.|.
 Frog   130 KFCLGERLYSDLAAALNSDSQHPGIDYIKVGFPPLLSIVSRMSQATVTSVLEYLVNWFEERNFTP 194

  Fly   170 DLLHDVWLARWLYATLVCLHLPLEPHVFSTLRYIARTCIHLRNQLKEDEVQRAAPYNLLLTLTVQ 234
            :      |.|||||.|.||..||.|...|.:|.:||.|..:|..::..|.:|.:..||.:.|..:
 Frog   195 E------LGRWLYALLACLEKPLLPEAHSLIRQLARRCSQVRAGVEHKEDERVSALNLFICLVGR 253

  Fly   235 VFAQNDFKD 243
            .|.|.|..|
 Frog   254 YFEQRDLAD 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gem2NP_649092.1 SIP1 21..238 CDD:461493 69/242 (29%)
gemin2NP_001096228.1 SIP1 21..258 CDD:461493 69/243 (28%)

Return to query results.
Submit another query.