DRSC/TRiP Functional Genomics Resources

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Protein Alignment MESR6 and RGD1306502

DIOPT Version :9

Sequence 1:NP_001262033.1 Gene:MESR6 / 40083 FlyBaseID:FBgn0036846 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001101124.1 Gene:RGD1306502 / 310158 RGDID:1306502 Length:434 Species:Rattus norvegicus


Alignment Length:440 Identity:141/440 - (32%)
Similarity:206/440 - (46%) Gaps:100/440 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 RHFQRIPVFIVDYHNDVLEFIYRCFATRHLPLQNNTLVHFDSHPDLVIPRHIAASSTYQKETMLN 156
            |.:.|:||::|:.|.:||.||||...::|||..|...:||||||||:||.::.|.:.:.||.:..
  Rat    12 RRYPRLPVWVVEDHQEVLPFIYRAIGSKHLPDSNIRFLHFDSHPDLLIPVNMPADTVFDKEALFG 76

  Fly   157 ELSIENWIMPTLYAEIENNVKGQIKKFYGHFNRVVWLKNSWCQQLPTGRHDFKVGQKD---DRIG 218
            ||||||||||.:||              |||:.|:||..:|.||:..|:|.|.|| ||   ..|.
  Rat    77 ELSIENWIMPAVYA--------------GHFSHVIWLHPTWAQQIREGKHHFLVG-KDISTTTIR 126

  Fly   219 VDCPLDYFIADGNYCTTEDLQDAKSVELQV------------HDADN------------------ 253
            |.....||::||.:...:.|::.|.::|.|            .|.|:                  
  Rat   127 VTSTDYYFLSDGLFVPEDQLENQKPLQLDVIMVEPYKLCSNQDDGDSVSSTKKPRLALGGGESTV 191

  Fly   254 -------------ESLNP-----------------NEFL-TEKDAKGFVLDIDLDFFSTSNPFLE 287
                         :::.|                 .|.| ..|....|||||||||||..|||.|
  Rat   192 AADGDSCSEGHRGDAVTPRSDSCSGSQQSQGTASTGEILGMLKTGDAFVLDIDLDFFSVKNPFKE 256

  Fly   288 IYKDADCYNQLKEIFHFESVEKVKKSGTATIADYLATAERRQTQLDALKTIFWHL----EEERNF 348
            ::.. |.|..|:|::.|:     |.....|..|.:...:.|..||:.|:.||..|    .||...
  Rat   257 MFTQ-DEYKILQELYQFK-----KPDSNLTEEDLVDVVDARTHQLEDLEAIFADLCDGDSEETVR 315

  Fly   349 EGLEKPDETVVTPEVYAKIVKLADQLQEKYPDDEIDWHLIFDSGSTTDNNGLPHHISIAEELETY 413
            :....|....:.|.|.:...::      :.|    |:.::..:|.|.|.:.||||||..||:|..
  Rat   316 KWASNPGMESLVPLVQSLTSRM------EVP----DYEMVHQAGLTCDYSELPHHISTEEEIEYL 370

  Fly   414 FANFKRFLQRLPVPPVAITMAHSAQDDYCPQDQVAFIEECVLRLLKEVFG 463
            ..:....|:.|| .|..:|:|.|:.|||||.:||..|:..||.:|..::|
  Rat   371 IQSVYSLLKSLP-KPTLVTIARSSLDDYCPPEQVDIIQGKVLDVLGSLYG 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MESR6NP_001262033.1 UPF0489 99..279 CDD:289412 78/243 (32%)
RGD1306502NP_001101124.1 UPF0489 19..169 CDD:289412 64/164 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349065
Domainoid 1 1.000 124 1.000 Domainoid score I5423
eggNOG 1 0.900 - - E1_28PEW
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10149
Inparanoid 1 1.050 172 1.000 Inparanoid score I4010
OMA 1 1.010 - - QHG59382
OrthoDB 1 1.010 - - D1501156at2759
OrthoFinder 1 1.000 - - FOG0007487
OrthoInspector 1 1.000 - - oto97719
orthoMCL 1 0.900 - - OOG6_107534
Panther 1 1.100 - - LDO PTHR13225
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5613
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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